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Detailed information on CNT30724430


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3043839Lupinus angustifoliusPrunus dulcis8.332096.2353forward
CNT30538793Lupinus angustifoliusBrassica napus12.2620.2193.5978forward

Expression of CNT30724430

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MRGLGSAFHETPYHKFPTRLFFSHPFSSLFPSINLKALLITESFVIQHES*

>peptide 2 (34 aa)
MNIELRLLDLYFCAFETCICSVIDTSNFHLECFV*

>peptide 3 (31 aa)
MSLLLCFFIRFTTIRQLWSYCLRSGVEGRLL*

Sequence

>CNT30724430
AAGGCCTTTGCGTAACCCGACCGATCCATGAGAGGATTAGGGTCCGCATTTCATGAAACACCGTACCATAAATTCCCAACCAGGCTTTTCTTTTCTCACC
CATTCTCTTCACTTTTCCCGTCCATAAACCTCAAAGCCCTTCTGATAACAGAATCGTTCGTCATCCAACATGAGAGCTAAGTGGAAGAAGAAGCGCATGA
GGAGGTTGAAGAGAAAGCGCAGAAAGATGAGACAAAGGTCTAAGTAGGTGAACTCGCACAACCAAGATGAGTTTACTCTTGTGTTTTTTCATCAGGTTCA
CGACAATTAGGCAGTTATGGTCTTATTGTTTGAGGTCTGGTGTTGAGGGTAGGCTTCTCTAGTTATGGTTTATGAATATTGAACTAAGACTATTGGATTT
GTATTTTTGTGCTTTTGAAACATGTATTTGTTCTGTTATAGATACATCAAATTTTCATCTTGAATGCTTTGTGTAAGAGTCTAGCATACGCAAGCAATTT
TTGTGTCGCGATCCTATTTATGCTATGTGTGTCTAACTGCTATTGCTATCACAAATGTTATAGCTGAGTCTGAACATCAAACTATAATAGATTTTGTATA
GTTTTAACCGATTAAATTATTTATTTGGATGATGTT