Detailed information on CNT30724415


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ATM8|PIP22_MAIZE, E-value = 9e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3070602Lupinus angustifoliusQuercus suber17.3931.7582100forward
CNT30632211Lupinus angustifoliusVigna unguiculata38.2672.3785.45220forward
CNT30710681Lupinus angustifoliusGlycine max24.1719.288.49139forward
CNT30145515Lupinus angustifoliusMedicago truncatula13.9132.6593.7580forward
CNT30120512Lupinus angustifoliusCitrus clementina11.6522.4194.0367forward

Expression of CNT30724415

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MLLNLNILSHLSFFLCKREKLVYNSYSSYLFMCVTII

>peptide 2 (40 aa)
SGRENSVDKNKGTNNLSTQSSAFVVARLNKVSTTSIPIKV*

>peptide 3 (65 aa)
MYNNALISDTLRPTNSPSNTQKTNSITFSTTCDLISLAIVTNNGQYCYVKEQKCCYELSYNCSIQ*

Sequence

>CNT30724415
CAGTGGCAGAGAAAACAGTGTAGACAAGAACAAAGGTACCAATAATCTCAGCACCCAAAGCAGTGCCTTTGTTGTAGCCAGGTTGAACAAAGTTAGCACC
ACCTCCATACCTATCAAAGTATGATTTTTGGAACCCCTTCACTAGTCCAGCTCCTGCAATAGCACCAGCACTCTGTGCTATTATGTACAACAACGCCCTT
ATTAGTGACACCTTGCGTCCCACGAATAGCCCAAGCAATACCCAAAAGACCAACTCCATCACATTCAGTACCACCTGTGATCTTATCAGTCTGGCTATTG
TAACCAATAATGGTCAATATTGTTATGTAAAGGAACAGAAGTGTTGCTATGAACTCAGCTATAACTGCTCTATACAATGACCACTTTCTCAACTCATCCA
AATCAAACAACGGTGCTGGTGGTGGGTCTTGGTAATCCTTAGCAGAGTACTCTCCTCCTCCTTGATGCTCTTGAACCTCAACATCCTTAGTCATCTTTCT
TTCTTCCTATGCAAGAGAGAAAAACTTGTATATAATAGCTATAGTAGCTACTTGTTTATGTGTGTGACAATTATT