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Detailed information on CNT30724340


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7J1C4|PSBL_ACOCL, E-value = 2e-19

BLAST vs NONCODE:
NONMEST001986, E-value = 3e-61

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30277508Lupinus angustifoliusChenopodium quinoa3027.5689.74234forward
CNT3060074Lupinus angustifoliusArabidopsis lyrata25.935.5691.09202forward
CNT30679284Lupinus angustifoliusTriticum urartu23.5959.3588.04184reverse complement
CNT30603960Lupinus angustifoliusOryza punctata43.7226.9888.27341reverse complement

Expression of CNT30724340

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MSPIRNMNHKRKYQLNRSQQYQLQYLLSKEESFQ*

Sequence

>CNT30724340
TTATCTTTCTTTCAATTTTAAATAAAAAGTATTGACAGATATTATTCCGTAAAAGATGTTTTGAATCAATTAATGAAGTTGATTTTTCAAAAACATCATC
AAAAACAATGAAATAAATGGAGTTTTTTTTTTAATCGCAAAAAGCAATCTAATATCTAGTGAGTCATTTGTACGAACAAAAAATATTTTAATTATTAAGA
ACTCAACGGGACCCCCTCGAATTTGTCAAAGAAAGGGTGGATCCCTGTTGAGTTCTTACACTTTCATTTCGAAAACTCAATTCATCCAATTACTACAGGG
ATGAGCCCAATCCGGAATATGAACCATAAAAGAAAATACCAATTAAACCGATCACAGCAATACCAGTTACAGTACCTATTATCCAAAGAGGAATCCTTCC
AGTAGTATCGGCCATTTATCCCACTTTCCTCCACATTTTATTAAGTAGTCATGCTAGAGACATAAACAGTCATAGATAATTATGAAATGATATCTTTCCG
ACTGGGATAAGATAATTCTTACTATTTCCTTTTCTTCTATTAATTGAAGAAATAATTTGAAAATAAAACAGCAAGTACAAAAATTAGTAATAAACCCCAG
TAGAGACTGGTACGATTCAATTCAACATTTTGTTCGTTTGGGTTTGATTGTGTCGTAGCTCTATAATTCGGATTAGGTTTATCGTTGGATGAACTGCATT
GCGGATATTGATCCCAAAAAAGAAACGATGGGTACCGCTAGTCCGTGAACAGCCAACCATCGTACTGTAAAAATTGGATA