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Detailed information on CNT30724288


BLAST search results

BLAST vs Swiss-Prot:
sp|P14226|PSBO_PEA, E-value = 2e-154

BLAST vs NONCODE:
NONTCAT000011, E-value = 1e-110

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547255Lupinus angustifoliusIpomoea triloba21.6447.6982.66248forward
CNT30515312Lupinus angustifoliusJuglans regia23.9117.5285.04274forward
CNT30700663Lupinus angustifoliusQuercus lobata30.2865.4786.46347forward
CNT30374900Lupinus angustifoliusArabidopsis thaliana22.9545.1179.09263forward
CNT30277684Lupinus angustifoliusChenopodium quinoa51.7566.1881.28593forward
CNT30727933Lupinus angustifoliusCorchorus capsularis35.9527.5686.65412forward
CNT30379731Lupinus angustifoliusManihot esculenta46.2547.7582.45530forward
CNT3042430Lupinus angustifoliusPrunus dulcis31.7633.4383.79364forward
CNT3091587Lupinus angustifoliusSolanum tuberosum26.3581.8481.79302forward
CNT30181115Lupinus angustifoliusSecale cereale25.5722.179.52293forward
CNT30287195Lupinus angustifoliusTriticum aestivum25.5733.0778.84293forward
CNT30221336Lupinus angustifoliusHordeum vulgare15.7126.0581.67180forward
CNT30385696Lupinus angustifoliusTriticum turgidum15.7144.4481.11180forward
CNT30567880Lupinus angustifoliusActinidia chinensis46.3423.3182.3531forward
CNT30592119Lupinus angustifoliusMusa acuminata23.9130.3479.2274forward
CNT3086209Lupinus angustifoliusVigna radiata42.3234.0684.54485forward
CNT30542247Lupinus angustifoliusBrassica napus20.5939.680.51236forward
CNT30238377Lupinus angustifoliusBrassica oleracea22.3447.6780.86256forward
CNT30508746Lupinus angustifoliusSolanum lycopersicum44.0760.9980505forward
CNT30147114Lupinus angustifoliusMedicago truncatula54.3635.1485.39623forward
CNT30436686Lupinus angustifoliusAegilops tauschii25.5727.2379.18293forward
CNT30244319Lupinus angustifoliusAvena sativa28.9737.9478.61332forward
CNT30658638Lupinus angustifoliusTriticum dicoccoides25.5723.6378.84293forward
CNT30264716Lupinus angustifoliusBrassica rapa23.4714.9680.3269forward
CNT30597992Lupinus angustifoliusFraxinus excelsior14.1446.4285.8162forward
CNT309111Lupinus angustifoliusZea mays15.7124.5281.67180forward
CNT30718209Lupinus angustifoliusMalus domestica golden43.6337.1583.4500forward
CNT30626592Lupinus angustifoliusDaucus carota47.8262.278.65548forward
CNT30680645Lupinus angustifoliusTriticum urartu25.5730.6279.18293forward
CNT30348024Lupinus angustifoliusEragrostis tef21.9940.8480.16252forward
CNT30368337Lupinus angustifoliusSorghum bicolor15.7127.0781.11180forward
CNT30356640Lupinus angustifoliusLactuca sativa27.9248.0581.25320forward
CNT30571041Lupinus angustifoliusVitis vinifera17.0253.7283.59195forward
CNT30704492Lupinus angustifoliusPrunus avium31.8538.8783.56365forward
CNT3036059Lupinus angustifoliusCucumis melo32.6461.1179.95374forward
CNT30584058Lupinus angustifoliusEchinochloa crusgalli21.9919.9180.16252forward
CNT30557665Lupinus angustifoliusPanicum hallii9.8620.2982.3113forward
CNT3051042Lupinus angustifoliusCucumis sativus40.3184.7780.09462forward

Expression of CNT30724288

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MYFLHTLYTNVVQPILSTKLMGIFIEQYRWPADLI*

>peptide 2 (41 aa)
MLHTHYQFKHGYFMHYNWKSIQYINITVLPLLLQFGQMTMQ*

>peptide 3 (37 aa)
MKLVQDRTSWQCICQMEKKMSLLHHQWLGIGLQFRYP*

>peptide 4 (70 aa)
MSLVFWNSSGAFLVTPSALTVNEVGSRQNFLAVYLPDGKENESAPPSMVGHWFAVPVPLTSKYVLLWISS*

>peptide 5 (48 aa)
NDDKMGNASELTHIVCIFCIHYIQMLSNPFCLPNLWAFLLSNTGGLRT*

Sequence

>CNT30724288
TAAATGATGACAAAATGGGCAATGCATCAGAGCTCACCCACATAGTATGTATTTTTTGCATACATTATATACAAATGTTGTCCAACCCATTTTGTCTACC
AAACTTATGGGCATTTTTATTGAGCAATACAGGTGGCCTGCGGACTTAATATAAGAAAAAAGAAGATCCGCAATGTCTGGTATGGGGTGCCCGCTTCCTT
GTATATACTTATCCATATCGTATATCAGGTAACTATGCTTCATACACACTATCAATTTAAACATGGATACTTTATGCATTATAATTGGAAGTCCATACAA
TATATAAACATAACAGTACTCCCACTGCTTCTCCAGTTTGGTCAAATGACAATGCAGTAACATCTGTAGGAGTTACAACAAAATCTGAACCAACAAAATA
CAAATTCAGAGCATAAAAAAAGAACCTCTTTATGAGTCAAGCTGAGCATACCAGACACCCTGGATCTTCACATCCTTAGGAGCTTTAGCTCCCAAATCAG
TGTCAGAAGGCTTGCTCTTGGTCACACTCAATGTGATTTTCCCTTTCGACGACGCAGCACTTTTGTTGTTTTCCTTGCCAAGTTCTTCCTCATCTCCTCT
TCCACCAGCAGGCAATGCAACCGCATTGTCGTAACCTGTAGAGGCACCCCTACCCTTTGGGTCCAAGAAAGAGGAACCGCGGTATGATGGCACTAGGAAA
TCCCCACTGAAGCTCTCTGGCTTCCCTGATGCAACCAACTGCTTGATGGTGAAAAGGAATGGCACGCGCTCACCACCAGGTAGCTGAACTGTGACTGCAG
CGTAGTCAATGCCATCTTTCTCCTCGAATTTGACAGTGCCATCGGGTGAAACTTCGAATGGCCCTTCGATTTCATCAAGGGTGTAGGTCAGGCGGGTCAT
GAGCTTGGTGTTCTGGAATTCAAGTGGGGCATTCTTGGTTACACCCTCAGCCTTGACTGTGAATGAAGTTGGTTCAAGACAGAACTTCTTGGCAGTGTAT
TTGCCAGATGGAAAAGAAAATGAGTCTGCTCCACCATCAATGGTTGGGCATTGGTTTGCAGTTCCGGTACCCTTGACTTCCAAGTATGTCTTGCTCTGGA
TTTCATCGTAGGTTAGCCGCTTTGGAACACCTTCGGCACTTGCTCC