Detailed information on CNT30724203


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LTA6|WAV3_ARATH, E-value = 5e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30710777Lupinus angustifoliusGlycine max59.7929.1186.05638forward

Expression of CNT30724203

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MPLLHKACFAVCLPLLTQIVLFYLCWVSESLLH*

>peptide 2 (37 aa)
MSTMEGVWYDCRRLVLSVESPRAVALCHECELNPDRT*

>peptide 3 (72 aa)
MNVSSILTEHKPFQIAHKHVGSPSSTASPLIQQKEQCITDPRLGKKQFQTMPCDNSPGQKPQQINYRIQLQL*

>peptide 4 (82 aa)
KNQKHIYCICIYNQVKKFTITTISFMYITLNRNIQHASYRHSYAFTVLYFGKIRNFIHLKFLPFHYLSPHLDKSIMSKIYKG*

Sequence

>CNT30724203
AAAAGAATCAAAAGCATATATATTGCATATGTATATATAATCAAGTAAAGAAATTCACCATCACAACAATCAGCTTTATGTACATCACACTGAACAGAAA
TATCCAACATGCCTCTTATCGCCATTCCTATGCATTTACAGTTTTATACTTTGGCAAAATTAGGAATTTTATCCACCTAAAATTCCTTCCTTTCCATTAT
TTAAGCCCCCACCTTGATAAAAGCATAATGAGCAAAATATATAAAGGGTAAAACAAAAGAAGATAAGAAGAAACTTAAAAGGTCTTCCCATAAGTGTATG
TATAGGCTGAGTAGAACTTTCCAAACACAGTTTCCATTATTATTGTTCCCTTCCATGCCTCTCAGGGAATGATTTTGCAGGGCAGAGGATTCGTCTACGT
TGTGGAGTCCCTAAAATGATGGTCTGAGAACGCGTCACCATGTCAACCATGGAAGGTGTTTGGTACGACTGCAGAAGGCTTGTGCTGTCTGTGGAATCGC
CTCGAGCCGTTGCCCTTTGCCATGAATGTGAGCTCAATCCTGACAGAACATAAGCCCTTCCAGATTGCTCATAAACATGTGGGCTCGCCATCCTCTACTG
CATCTCCTTTAATTCAGCAGAAAGAGCAATGCATAACCGATCCCCGGCTTGGGAAGAAACAGTTTCAGACAATGCCTTGTGACAACTCTCCAGGACAGAA
ACCGCAGCAGATAAATTACCGCATTCAGCTGCAACTCTAGCCTCAGCCAATGCCTCTGCTGCACAAAGCCTGTTTCGCTGTCTGTCTACCTCTATTGACA
CAAATAGTTCTGTTCTACCTATGTTGGGTCTCTGAATCTTTACTTCACTAGTTTCTTCCAAATCTACCATTTCTCTTGTTATAGGGTCTCTGTAAAGACC
TCTCACAATCAACAACGTCATCTCATCACTTGAACTATCAACTGGAACATTGACTGTCACCAAAAAATCTCTTTCTTCTTCAGCATAAAGATCTCCTGCA
TTAGTAGAAGTCATTCTAGCATTTGGCCATCAAGCTTGTGTGGTAACTTCCTGCTTTTACTGAACCA