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Detailed information on CNT30724029


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT007048, E-value = 5e-110

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381152Lupinus angustifoliusManihot esculenta70.8499.2285.85763forward
CNT30203420Lupinus angustifoliusHelianthus annuus47.45101.7980.23511forward

Expression of CNT30724029

Peptides detected in this lncRNA

>peptide 1 (77 aa)
MMMTWDVKLAASLAGSSLEFEATKPRLRSLTATFLTLNPTLSPGRASWRASWCISTDLTSVVRPVGPKVTNIPGACL*

>peptide 2 (62 aa)
MSLTAKRPRGGYSEKVSTTMGLVGIILTKPASPFFKNLGSFSSSLPDRLSILVKISPNLTAM*

>peptide 3 (42 aa)
MMRSFLLCCSLGDLGSSGILLLHTLDDSNSNSLTHVSHSKTT*

Sequence

>CNT30724029
AAAACTGAAACAACATAAAAGGGAATATAAATGGGATAAATAACCCTTGATTGAAGCAAAAAGTACTGTCAAAAACACAATAGCATGAAAATTGTCCACA
GCCGATCAAGAACCCAGTTTTGAAAACTAGGGCTCATAAATCAGCATAAACTTGAAAACGGAAATGATAAATCAAACACCTAGGACACTGCAAAAGTAAA
ACTAATATAAAGAAACAACACTTTTCTGTAACCAGGACTATGATCACAACAACTGACAGAAGAACGGAGAGCATATGATGCGATCATTTCTTCTTTGCTG
CAGCCTTGGTGACCTTGGCTCCAGTGGGATCCTTCTTCTCCACACTCTTGATGACTCCAACAGCAACAGTCTGACGCATGTCTCTCACAGCAAAACGACC
TAGAGGAGGATACTCAGAGAAAGTCTCAACCACCATGGGCTTGGTTGGAATCATCTTAACCAAACCTGCATCACCATTCTTCAAGAATTTGGGCTCCTTC
TCGAGCTCCTTACCAGATCGCCTGTCAATCTTGGTCAAGATTTCACCAAATTTAACAGCAATGTGAGATGTGTGGCAATCAAGCACTGGTGCATAACCAT
TTCCAATCTGGCCAGGATGGTTCATGATGATGACTTGGGATGTGAAGTTGGCAGCTTCCTTGGCAGGGTCATCCTTAGAGTTTGAGGCAACAAAACCACG
CTTGAGATCCTTGACTGCAACATTCTTAACATTGAATCCCACATTGTCTCCTGGAAGAGCCTCCTGGAGAGCCTCGTGGTGCATCTCCACAGACTTAACT
TCAGTTGTCAGACCAGTTGGACCGAAAGTAACCAACATACCAGGGGCTTGTCTGTAGGCCTCTTGGGCTCATTGATCTGGTCAAGAGCCTCAAGTAGAGT
TGGTCCCTTGTACCACTCAAGGTTGGTGGACCTCTCAATCATGTTGTCACCCTCAAAACCAGAGATAGGCACAAATGAAATTTTGTCTGGGTTGTAACCA
ACCTTCTTCAGGTAGGAAGAAACTTCCTTCACGATTTCATCATACCTAGACTTAGAGTACTTTGGAGTAGTGGCATC