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Detailed information on CNT30724026


BLAST search results

BLAST vs Swiss-Prot:
sp|O64937|EF1A_ORYSJ, E-value = 0.0

BLAST vs NONCODE:
NONGMAT001702, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691950Lupinus angustifoliusOryza sativa58.2653.2785.58839forward
CNT30521010Lupinus angustifoliusSetaria italica58.8277.7186.66847forward
CNT30639730Lupinus angustifoliusNymphaea colorata40.9764.283.39590forward
CNT30535563Lupinus angustifoliusEucalyptus grandis53.1993.8784.86766forward
CNT30316757Lupinus angustifoliusCorylus avellana50.1460.2787.4722forward
CNT30546799Lupinus angustifoliusIpomoea triloba58.5468.6585.77843forward
CNT30518094Lupinus angustifoliusJuglans regia58.6890.2884.85845forward
CNT30618377Lupinus angustifoliusSesamum indicum26.32101.6183.11379forward
CNT3021028Lupinus angustifoliusCitrullus lanatus59.1768.684.39852forward
CNT30727590Lupinus angustifoliusCorchorus capsularis58.9662.6687.4849forward
CNT30380230Lupinus angustifoliusManihot esculenta58.6834.8385.21845forward
CNT30525464Lupinus angustifoliusPhaseolus vulgaris40.28102.6583.62580forward
CNT30629525Lupinus angustifoliusVigna unguiculata26.8189.7789.9386forward
CNT30194937Lupinus angustifoliusPisum sativum59.185.1989.66851forward
CNT30712097Lupinus angustifoliusGlycine max29.2435.2988.6421forward
CNT30160120Lupinus angustifoliusPistacia vera58.6867.9887.46845forward
CNT30224132Lupinus angustifoliusHordeum vulgare28.6860.283.29413forward
CNT30387246Lupinus angustifoliusTriticum turgidum58.7573.582.39846forward
CNT30564256Lupinus angustifoliusActinidia chinensis42.6452.7583.71614forward
CNT30541587Lupinus angustifoliusBrassica napus56.669.385.4815forward
CNT30233993Lupinus angustifoliusBrassica oleracea58.1377.9385.3837forward
CNT30173274Lupinus angustifoliusTrifolium pratense58.5462.6890.75843forward
CNT30146334Lupinus angustifoliusMedicago truncatula45.3565.6989.43653forward
CNT30246955Lupinus angustifoliusAvena sativa58.7547.9384.28846forward
CNT30665783Lupinus angustifoliusTriticum dicoccoides57.0190.1281.97821forward
CNT30310418Lupinus angustifoliusCamelina sativa58.1372.1685.9837forward
CNT3059230Lupinus angustifoliusArabidopsis lyrata57.8569.386.31833forward
CNT3078925Lupinus angustifoliusBrassica juncea58.5471.9985.29843forward
CNT30614135Lupinus angustifoliusArabis alpina49.3845.5886.22711forward
CNT30449495Lupinus angustifoliusSaccharum spontaneum58.7569.5285.7846forward
CNT30132437Lupinus angustifoliusLolium perenne58.3369.8882.62840forward
CNT3011166Lupinus angustifoliusZea mays57.9959.0585.51835forward
CNT30608730Lupinus angustifoliusGossypium raimondii31.0474.584.79447forward
CNT30647369Lupinus angustifoliusRosa chinensis29.0346.1487.8418forward
CNT30127375Lupinus angustifoliusCorymbia citriodora36.5394.2784.6526forward
CNT30685098Lupinus angustifoliusTriticum urartu33.8933.286.68488forward
CNT30350898Lupinus angustifoliusEragrostis tef58.5475.6786.36843forward
CNT30368495Lupinus angustifoliusSorghum bicolor50.9772.0385.97734forward
CNT30355521Lupinus angustifoliusLactuca sativa48.3372.9685.2696forward
CNT30427611Lupinus angustifoliusPapaver somniferum58.6160.5586.37844forward
CNT30706337Lupinus angustifoliusPrunus avium56.1169.387808forward
CNT3024315Lupinus angustifoliusPopulus trichocarpa44.1783.3686.01636forward
CNT30148140Lupinus angustifoliusBrachypodium distachyon2594.7486.11360forward
CNT30101006Lupinus angustifoliusOryza rufipogon27.7157.3384.96399forward
CNT30585575Lupinus angustifoliusEchinochloa crusgalli25.3571.4386.3365forward
CNT30496962Lupinus angustifoliusDigitaria exilis58.8275.3685.95847forward
CNT30116111Lupinus angustifoliusOryza nivara20.7634.1787.63299forward
CNT30594443Lupinus angustifoliusEragrostis curvula58.8272.9586.54847forward
CNT30603820Lupinus angustifoliusOryza punctata58.7578.4185.58846forward
CNT30176122Lupinus angustifoliusVigna angularis57.9973.7684.43835forward
CNT30113122Lupinus angustifoliusFicus carica34.159.1684.32491forward
CNT3050294Lupinus angustifoliusCucumis sativus36.7486.385.26529forward

Expression of CNT30724026

Peptides detected in this lncRNA

>peptide 1 (93 aa)
MMMTWDVKLAASLAGSSLEFEATKPRLRSLTATFLTLNPTLSPGRASWRASWCISTDLTSVVRPVGPKVTNIPGFTTPVSTRPTGTVPIPPIL*

>peptide 2 (87 aa)
MYLVKTTDHLLDSKSESKKSMLTGLSILGNTSFKPTSGRIDDKDSTVSLRCSCNHVLNEITMSRSINDSAVVPSGLKLPQSNINGNSS

>peptide 3 (62 aa)
MSLTAKRPRGGYSEKVSTTMGLVGIILTKPASPFFKNLGSFSSSLPDRLSILVKISPNLTAM*

>peptide 4 (42 aa)
MMRSFLLCCSLGDLGSSGILLLHTLDDSNSNSLTHVSHSKTT*

Sequence

>CNT30724026
TCCACACCCACATACCAACTTTTGATAAAAACTGAAACAACATAAAAGGGAATATAAATGGGATAAATAACCCTTGATTGAAGCAAAAAGTACTGTCAAA
AACACAATAGCATGAAAATTGTCCACAGCCGATCAAGAACCCAGTTTTGAAAACTAGGGCTCATAAATCAGCATAAACTTGAAAACGGAAATGATAAATC
AAACACCTAGGACACTGCAAAAGTAAAACTAATATAAAGAAACAACACTTTTCTGTAACCAGGACTATGATCACAACAACTGACAGAAGAACGGAGAGCA
TATGATGCGATCATTTCTTCTTTGCTGCAGCCTTGGTGACCTTGGCTCCAGTGGGATCCTTCTTCTCCACACTCTTGATGACTCCAACAGCAACAGTCTG
ACGCATGTCTCTCACAGCAAAACGACCTAGAGGAGGATACTCAGAGAAAGTCTCAACCACCATGGGCTTGGTTGGAATCATCTTAACCAAACCTGCATCA
CCATTCTTCAAGAATTTGGGCTCCTTCTCGAGCTCCTTACCAGATCGCCTGTCAATCTTGGTCAAGATTTCACCAAATTTAACAGCAATGTGAGATGTGT
GGCAATCAAGCACTGGTGCATAACCATTTCCAATCTGGCCAGGATGGTTCATGATGATGACTTGGGATGTGAAGTTGGCAGCTTCCTTGGCAGGGTCATC
CTTAGAGTTTGAGGCAACAAAACCACGCTTGAGATCCTTGACTGCAACATTCTTAACATTGAATCCCACATTGTCTCCTGGAAGAGCCTCCTGGAGAGCC
TCGTGGTGCATCTCCACAGACTTAACTTCAGTTGTCAGACCAGTTGGACCGAAAGTAACCAACATACCAGGCTTCACGACACCAGTCTCAACACGTCCCA
CAGGCACTGTGCCAATACCACCAATCTTGTAGACATCTTGCAATGGAAGCCTGAGGGGCTTGTCTGTAGGCCTCTTGGGCTCATTGATCTGGTCAAGAGC
CTCAAGTAGAGTTGGTCCCTTGTACCACTCAAGGTTGGTGGACCTCTCAATCATGTTGTCACCCTCAAAACCAGAGATAGGCACAAATGAAATTTTGTCT
GGGTTGTAACCAACCTTCTTCAGGTAGGAAGAAACTTCCTTCACGATTTCATCATACCTAGACTTAGAGGAGATTAATGTACCTTGTTAAGACCACAGAT
CATTTGCTTGACTCCAAGAGTGAAAGCAAGAAGAGCATGCTCACGGGTTTGTCCATCCTTGGAAATACCAGCTTCAAACCCACCAGTGGTAGAATCGATG
ATAAGGACAGCACAGTCAGCCTGAGATGTTCCTGTAATCATGTTCTTAATGAAATCACGATGTCCAGGAGCATCAATGACAGTGCAGTAGTACCTAGTGG
TCTCAAACTTCCACAAAGCAATATCAATGGTAATTCCTCT