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Detailed information on CNT30723975


BLAST search results

BLAST vs Swiss-Prot:
sp|O64937|EF1A_ORYSJ, E-value = 5e-173

BLAST vs NONCODE:
NONGMAT000814, E-value = 9e-118

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3076676Lupinus angustifoliusBrassica juncea69.9770.7684.24806forward

Expression of CNT30723975

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MMRSFLLCCSLGDLGSSGILLLHTLDDSNSNSLTHVSHSKTT*

>peptide 2 (70 aa)
MMMTWDVKLAASLAGSSLEFEATKPRLRSLTATFLTSVVRPVGPKVTNIPGFTTPVSTRPTGTVPIPPIL*

>peptide 3 (62 aa)
MSLTAKRPRGGYSEKVSTTMGLVGIILTKPASPFFKNLGSFSSSLPDRLSILVKISPNLTAM*

Sequence

>CNT30723975
TCCACACCCACATACCAACTTTTGATAAAAACTGAAACAACATAAAAGGGAATATAAATGGGATAAATAACCCTTGATTGAAGCAAAAAGTACTGTCAAA
AACACAATAGCATGAAAATTGTCCACAGCCGATCAAGAACCCAGTTTTGAAAACTAGGGCTCATAAATCAGCATAAACTTGAAAACGGAAATGATAAATC
AAACACCTAGGACACTGCAAAAGTAAAACTAATATAAAGAAACAACACTTTTCTGTAACCAGGACTATGATCACAACAACTGACAGAAGAACGGAGAGCA
TATGATGCGATCATTTCTTCTTTGCTGCAGCCTTGGTGACCTTGGCTCCAGTGGGATCCTTCTTCTCCACACTCTTGATGACTCCAACAGCAACAGTCTG
ACGCATGTCTCTCACAGCAAAACGACCTAGAGGAGGATACTCAGAGAAAGTCTCAACCACCATGGGCTTGGTTGGAATCATCTTAACCAAACCTGCATCA
CCATTCTTCAAGAATTTGGGCTCCTTCTCGAGCTCCTTACCAGATCGCCTGTCAATCTTGGTCAAGATTTCACCAAATTTAACAGCAATGTGAGATGTGT
GGCAATCAAGCACTGGTGCATAACCATTTCCAATCTGGCCAGGATGGTTCATGATGATGACTTGGGATGTGAAGTTGGCAGCTTCCTTGGCAGGGTCATC
CTTAGAGTTTGAGGCAACAAAACCACGCTTGAGATCCTTGACTGCAACATTCTTAACTTCAGTTGTCAGACCAGTTGGACCGAAAGTAACCAACATACCA
GGCTTCACGACACCAGTCTCAACACGTCCCACAGGCACTGTGCCAATACCACCAATCTTGTAGACATCTTGCAATGGAAGCCTGAGGGGCTTGTCTGTAG
GCCTCTTGGGCTCATTGATCTGGTCAAGAGCCTCAAGTAGAGTTGGTCCCTTGTACCACTCAAGGTTGGTGGACCTCTCAATCATGTTGTCACCCTCAAA
ACCAGAGATAGGCACAAATGAAATTTTGTCTGGGTTGTAACCAACCTTCTTCAGGTAGGAAGAAACTTCCTTCACGATTTCATCATACCTAGACTTAGAG
TACTTTGGAGTAGTGGCATCCATCTGTTACAAAAGTTCATTACCTTAGTCAA