Detailed information on CNT30723626


BLAST search results

BLAST vs Swiss-Prot:
sp|P83505|ATPB_BRACM, E-value = 6e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730658Lupinus angustifoliusCorchorus capsularis23.117.0793.28134reverse complement
CNT30526646Lupinus angustifoliusPhaseolus vulgaris40.8633.5784.39237forward
CNT30492881Lupinus angustifoliusOlea europaea21.0318.9192.62122reverse complement
CNT30163195Lupinus angustifoliusPistacia vera2049.7988.79116forward
CNT30355468Lupinus angustifoliusLactuca sativa21.7210.385.71126reverse complement
CNT30644293Lupinus angustifoliusCannabis sativa17.9332.494.23104reverse complement

Expression of CNT30723626

Peptides detected in this lncRNA

>peptide 1 (35 aa)
SINRSTSCSLTSRKYSAIVRAVNPTLIRTPGGSFI*

>peptide 2 (33 aa)
MNRYYYIPIPSRYLTSQGKNRRFHIVLLIEKSI*

Sequence

>CNT30723626
TGTCGATAAATAGGAGTACGTCTTGTTCATTGACATCCCGGAAATATTCCGCTATAGTTAGGGCAGTTAACCCAACTCTCATACGAACTCCGGGCGGTTC
ATTCATTTGACCGTAGACTAGAGCCACTTTTGATTCTGCAATATTTTGTTCATTAATTACTCCAGATTCTTTCATTTCGTATGAATCGATATTATTACAT
TCCAATTCCTTCCCGATACCTTACCTCCCAAGGAAAAAACCGAAGATTTCACATAGTACTTTTGATCGAAAAATCAATCTGATTTATTTCCTACCTTTCG
CTCAATGAGAAAATGGATCAGATTCTACAGGATCAAACCTGTGGGACTTAAGGAATGATGGAAGAAAATCAAATATATATATATAAGTAAATAAGTAAAT
AGCAGTAGAAGAGTCCAGATTCCAAACGAACAAGTTCAAACTTGATTGAAAAGGATCTTTCTGATTCTCGAAGAATGGGGGGGCAAAAAAAAGGATTGAT
CGAGAAAGATTTCTTGTTCTTATTATAAGATCGTGATTGGATCCACATATGTTTGGTAAAAAGAATAATCTTCATAAGAA