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Detailed information on CNT30723483


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30145750Lupinus angustifoliusMedicago truncatula3.5422.889.4757forward

Expression of CNT30723483

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MAELEESDEKESPEIDEARSTIAEVEKVIETTEA*

>peptide 2 (52 aa)
MTLGCAFPFGFVPGLVSGAGLEACTTLVTGGKGASVTSESDKDGSGAAAGGK*

>peptide 3 (62 aa)
MDGHTSTMITTPGREVWFFVNDKNSDNVKSDPTFLYFGFLNKLYLVKGFNIEAAENREQKRS*

Sequence

>CNT30723483
CCCTTATCAAAAAAGAACAAAACGGTGCGTTTTTGGGTGAGAGTAAAGGTTTAGTTGAAACTTGATCATCTTCTTCGTCGTGGATCTGCTTCGGTGCTGC
ATTCAGAAGCAGCTATTTAAACTGTAAACCATTTCTTTCTCTTCTTATTTTCCTATTTTTTCATTCACAATTAATGAAGCATTGTAGTGAACTTATGTTT
TACTTTTCAATTATTTTGGTTCAAAAATGCAACTTTCGATACTAGCATTTCTCCCCAAAGGTATAGATTGAAGTCCTTATTTGTTTGAAGGGTACAAAGA
GCTACTATGGAGTTGGCATCTTAATTCTTTAGATATGTCTTGCATTACTTATTGATCATTATGGAAAATGTGCTAGCTGAGTCTAGGATTATGATTCCTT
ATTGATCTTGTATATCATAAACAAGAGATTTTGATAGGAATATGGCTGAGCTGGAGGAGTCTGATGAGAAGGAAAGTCCTGAAATTGATGAAGCTAGAAG
CACCATTGCAGAAGTTGAAAAAGTAATTGAAACAACTGAAGCTTAGGAAGAATTAAGGAAGGAAGAATGAACATACACAGGGGTAACAAATAAGGGAAAG
AATTTCCTGTTGTTATGTGAAAAAAATCTGGATTATACAAGTAGTCTGAAGCTGAAAAACTTCAGGCCACTTAATCCAAGAAGAGAAGTGGAAAATAGAG
AGGTGAAACTAGCAAAAGCACCTTTGGCTAGCACTCAAATCAGAAGAAGAGAAGTTACAAGCACAGCAAGACTGGGCAAGAAGAAGCAGGCAATGACCTT
GGGTTGTGCATTTCCCTTTGGTTTTGTTCCTGGGTTGGTTTCAGGGGCAGGGCTAGAAGCCTGCACCACCTTGGTAACAGGCGGCAAAGGTGCCTCTGTC
ACCTCAGAATCTGACAAAGATGGGAGCGGAGCCGCGGCCGGAGGCAAGTAACCTTTGTCGATGACTCCAAAAAGACCCCCTGGTTGAACAGGCTGCATGT
AAATAGTTTTTGGAAAGTCGGTGATGACACCATCAATATCTGATCCCTGAATATAAGAGTTGATCTCCGTGGTTGCATCTGAGTAGAAATCCCACGCCTG
AGATACAAACTCATTGCTGAAAGTTTCAACGAAAACCGATAGATTGGAAGATTTTAGTTTTGACACAGTATTTGTAGATGTGACAAGGAAGCTATCTGTA
AGGGGAAATACAGATTTCTTGTTGATAACCACAGAACTAGCAAAGCGTTTTATATCATCAACAGCTGAAGTAGCAGCATCACCAACAGCCTCATCAATCT
TGTATACACGCTGCTGATAGAATGTATCCTATACAAGAATAAAGTCATGGACGGACATACCTCAACAATGATAACAACACCTGGTAGAGAAGTCTGGTTT
TTTGTAAATGACAAGAATTCAGACAATGTTAAAAGTGACCCAACATTCTTATATTTTGGATTCCTGAACAAGCTGTATTTAGTAAAAGGGTTCAATATTG
AGGCTGCAGAAAACAGAGAACAGAAAAGAAGCTAGAGTGTATTCCAAGCGGTGGTGGTGTTTGATATCTGAGCTGAAACGGAAGCTATAAGGAAGAAAGA
GTGAAAAAG