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Detailed information on CNT30723409


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381428Lupinus angustifoliusManihot esculenta22.6912.4186.7398forward
CNT30172717Lupinus angustifoliusTrifolium pratense21.36.5189.1392forward
CNT30118924Lupinus angustifoliusCitrus clementina22.4517.5186.697forward

Expression of CNT30723409

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MVETQARPKIELGQADFETQQSTETPRRFLLSHNFQS*

>peptide 2 (41 aa)
TKPKIALSFCIIQKYKTMKMAVKEHGRNSSKTKNRVRPSRL*

>peptide 3 (78 aa)
MRMFPLILMEEINEHHQLKLDSDILLVLLYLCSNLLLQDKYFSLKASGSFIKANSTAAELTETAPAAIFVSVLTLFPTV

Sequence

>CNT30723409
ATACAAAGCCCAAGATAGCACTTTCATTTTGTATAATACAAAAGTACAAAACCATGAAGATGGCTGTGAAAGAACATGGTAGAAACTCAAGCAAGACCAA
AAATAGAGTTAGGCCAAGCAGACTTTGAGACACAACAATCAACTGAAACACCAAGGAGATTTCTACTGTCACATAATTTTCAATCCTAAAAGGATGAGGA
TGTTTCCTCTTATTCTAATGGAGGAAATAAATGAGCATCATCAATTAAAATTGGATTCAGATATCCTTCTGGTTTTGCTCTACCTTTGCTCGAATCTTCT
GCTCCAAGACAAATATTTCAGTCTCAAGGCTTCAGGTAGCTTCATAAAGGCCAATTCAACAGCAGCCGAGCTTACAGAAACTGCCCCGGCAGCAATATTC
GTCTCAGTTCTAACCCTCTTCCCAACAGTAAT