Detailed information on CNT30723091


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 9e-102

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-87

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30307860Triticum speltaTriticum aestivum77.3575.84100584forward
CNT30226487Triticum speltaHordeum vulgare68.3483.7792.44516forward
CNT30242408Triticum speltaAvena sativa63.4464.8294.78479forward
CNT30141701Triticum speltaLolium perenne62.2564.3894.26470forward
CNT30688478Triticum speltaTriticum urartu99.8740.6295.36754forward

Expression of CNT30723091

SRR9114152: 6.57 RPKM

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICKYKADRNQSKLAYRDICSTSNNK*

>peptide 2 (98 aa)
GTETKTVQATTDTDQTPLEDTGDTETCEPRDRSSSMARSLLATTETEHQVKGGLLLDVVVRQGAAILKLLTGKDETLLVRGNALLVLDLRLHVVNGVR*

>peptide 3 (50 aa)
MVQKQRQFRQRQTQTRLHWRIPETPRLVNPETEAAPWPGAYWPPRRRSTK*

>peptide 4 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSRVMVLPVRVFTNICMPPRSLSTKWRVDSFWML*

Sequence

>CNT30723091
ATGGTACAGAAACAAAGACAGTTCAGGCAACGACAGACACAGACCAGACTCCATTGGAGGATACCGGAGACACCGAGACTTGTGAACCCAGAGACAGAAG
CAGCTCCATGGCCAGGAGCTTACTGGCCACCACGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAAGGTGCGGCCATC
CTCAAGCTGCTTACCGGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCAGATGAC
TCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAATATCTGCATGCCACCACGGAGCCTGAGCACCAAGTGGAGGGTGGACTCCTTCTGGA
TGTTGTAGTCCGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTTGC
CTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACGAAGATCTGCATCTGTAAATACAAAGCAGAC
AGAAACCAGAGTAAGTTAGCGTACAGGGATATCTGCAGTACGTCAAACAATAAATGAACCAGATGGCCACCATGCTACAAAGATGAAATTGCAACAGAGA
TGAAATCAGCTAGAGAGCTGACAGCAAACTGCCCAGGAGCTGGCCCCTAGAACAA