Detailed information on CNT30723089


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30223386Triticum speltaHordeum vulgare10030.7599.36314forward
CNT30439298Triticum speltaAegilops tauschii10032.61100314forward

Expression of CNT30723089

SRR9114152: 2.22 RPKM

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MQGAVLALPSQDRSHTCHVRDRPPQLCIDRKAGRQSPQPTGVVTSSMSPLDSRHAMIPQGG*

Sequence

>CNT30723089
ATGCAAGGCGCCGTCTTAGCCTTGCCTTCCCAGGATCGCTCCCACACCTGTCACGTTCGTGATCGGCCTCCTCAACTGTGTATCGATCGAAAGGCAGGGC
GGCAGAGCCCCCAACCGACGGGAGTAGTTACGTCCAGTATGTCCCCCCTCGATTCCCGACATGCTATGATACCCCAGGGTGGGTAGGAGCGGGTCGAGTC
CGTATCACCGCGGAACAACTGCAGCGTCCGGATCTGATCTATCTACTCGGCAATTCATCCGGTGACTTCACGGTCGCCAAAGAAGCCCCAAGAAGCATCA
AACATTTCCGATGA