Detailed information on CNT30723054


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30191267Triticum speltaSecale cereale62.3791.1895.16310forward
CNT30307634Triticum speltaTriticum aestivum94.9773.8799.79472forward
CNT30442977Triticum speltaAegilops tauschii55.9459.2899.64278forward
CNT30256571Triticum speltaAvena sativa56.7446.1590.78282forward

Expression of CNT30723054

SRR9114152: 290.12 RPKM

Peptides detected in this lncRNA

>peptide 1 (96 aa)
AHSLWAFERLTSSGPYSRSYLPRVSLLVTPQCASLSPTSPTPHHKTAAAAGGGGEAAGARRRSREEATDHEGQVEEEAHEEAEEEAPKDEAAIQVG*

>peptide 2 (61 aa)
MEVVMACCSLQCVSFAAADCRHTCLAFWRHSSHLSTSLIPETCTLVGLLSMLLVVSGVLLS*

Sequence

>CNT30723054
CGCCCATAGCCTGTGGGCCTTCGAGCGGCTAACAAGCTCAGGCCCATATTCTCGAAGCTACCTTCCTAGGGTTTCGCTTCTTGTAACCCCCCAGTGCGCC
TCCCTTTCTCCCACTTCCCCCACTCCCCACCACAAGACCGCCGCCGCCGCAGGAGGAGGAGGAGAAGCAGCAGGCGCGAGAAGGAGATCTCGCGAGGAGG
CGACCGACCATGAGGGCCAAGTGGAAGAAGAAGCGCATGAGGAGGCTGAAGAGGAAGCGCCGAAAGATGAGGCAGCGATCCAAGTAGGCTGATGGAGGTG
GTGATGGCGTGCTGTAGCTTGCAATGTGTGTCTTTCGCTGCGGCTGACTGCAGGCATACTTGCTTGGCATTTTGGCGCCATTCTTCTCATCTGTCAACTT
CGCTTATTCCAGAAACCTGCACTTTAGTAGGCCTGTTATCGATGCTTTTAGTTGTATCAGGAGTTTTGCTATCATGACCAATCTATCGAACCGTATG