Detailed information on CNT30722600


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30658545Triticum speltaTriticum dicoccoides73.9872.1991.74327forward
CNT30459719Triticum speltaSaccharum spontaneum18.131.8786.2580forward

Expression of CNT30722600

SRR9114152: 2.37 RPKM

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MESTTATSPSRSLCHHRPLLHHGRLWIELIRTQER*

Sequence

>CNT30722600
CGGTATATAAAGCATCGCACTTGTTATGTTGCATAAAAAAAATTCAAAAATGGACCGGTGATAAATAGTATCATCAACCTGTTAGGTTGATCTCTCCACC
GAGTAGGCTCAATGGCCCATCGGGCCCTGATCTATTCGCGCCCTGATCGAGGGCGCCTAACCCTCTTATGGTTGGTGGGCCCCTGCGACCTGTGATATAT
AGAGAGGTGGGGGCGGGGCACACGGTACGAGGTTAACCGCACCGCCAGACTCCTCATCGAAATCCCCTTCCGATCTAGCGCAATCGCAGTGCTCATGGAA
AGCACCACTGCCACCTCTCCATCTCGATCCCTCTGCCATCACCGGCCCCTACTTCACCATGGCCGGCTCTGGATCGAGCTCATCCGCACCCAAGAAAGGT
AGGTTACCGGAAAGATCTAGCATACACGATCCAAGTGGGTCT