« Back to Triticum spelta search


Detailed information on CNT30722071


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30247625Triticum speltaAvena sativa37.2941.8291.06179forward

Expression of CNT30722071

SRR9114152: 146.05 RPKM

Peptides detected in this lncRNA

>peptide 1 (99 aa)
TPLGFPPSSAPSPYKYEARAPAANNLTRAPAARVFVHTLPPPPSPRTGERGRHRRRDEGQVEEEEDEEAQEEAPKDEAAIQVGALEGGEASSYIQAAEL*

Sequence

>CNT30722071
AACCCCGCTAGGGTTTCCCCCCTCTTCAGCACCCAGCCCGTATAAGTACGAGGCGAGAGCCCCCGCCGCCAACAATCTAACGAGAGCCCCCGCCGCTAGG
GTGTTCGTCCACACACTCCCGCCGCCGCCATCCCCGCGAACCGGAGAGCGAGGCCGACACCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGGATG
AGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGCGATCCAAGTAGGTGCCTTGGAGGGAGGGGAAGCATCATCTTACATCCAGGCAGCGGAACTCTG
AGGGATGATGGCATTGTCCGAGTGATTCCTGATTTGTTTTGCGGTTGTGGCTGTGGAAGTTGCTTTACCTGTGTTTAGCTGTTTAATACTAGTCTGGCTA
TGTTCCAGGACTGAGTTTTATGTAATGTGAGGATTATATGTGTTTGTGACTGAATTTTATGCACCTATTATCTTTGAGGT