Detailed information on CNT30721905


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2QLY4|METE2_ORYSJ, E-value = 3e-63

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30440702Triticum speltaAegilops tauschii97.63100100330forward
CNT30689646Triticum speltaTriticum urartu85.2110099.65288forward

Expression of CNT30721905

SRR9114152: 42.46 RPKM

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MYLIPASAICFQMLALRSVATFSKSSALLLPSQKDSRANLSSLLGPMRGYPTMWDAIF

>peptide 2 (29 aa)
MSNGLGRHRAWRWCQEPDHSRRRCCWGCT*

Sequence

>CNT30721905
CGCCTTAGCCTCCTTGTACTCATTGATAGCCTTGTGAGAAGAGTAGGAGAACTTGGTGCTCAAATTGATCTCCCCACCGGTCCATGAGTAACGGTCTGGG
ACGGCACCGAGCATGGCGGTGGTGTCAAGAACCTGATCATAGTAGGAGAAGGTGTTGCTGGGGATGTACTTGATCCCAGCATCAGCCATCTGCTTCCAGA
TGCTGGCCCTGAGGTCGGTGGCAACCTTCTCCAAATCCTCGGCGCTGCTCTTGCCATCCCAGAAAGACTCCAGGGCAAACTTGAGCTCCCTCTTGGGGCC
CATGCGCGGGTATCCGACAATGTGGGACGCCATCTTTC