Detailed information on CNT30721902


BLAST search results

BLAST vs Swiss-Prot:
sp|P93263|METE_MESCR, E-value = 3e-22

BLAST vs NONCODE:
NONVVIT002763, E-value = 4e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534084Triticum speltaEucalyptus grandis58.1357.8488.98118forward
CNT30403132Triticum speltaBeta vulgaris43.3527.4188.6488forward
CNT3096726Triticum speltaSolanum tuberosum31.0326.5890.4863forward
CNT30137932Triticum speltaLolium perenne54.1943.6588.18110forward
CNT30371430Triticum speltaOryza glumipatula29.5628.1786.6760forward
CNT30604869Triticum speltaOryza punctata61.5847.8990.4125forward

Expression of CNT30721902

SRR9114152: 0.0 RPKM

Peptides detected in this lncRNA

>peptide 1 (59 aa)
NLGWSFLTKDQLRIVTGPVSIPFIGRAVMLCAILDQKTVMGLSFFCCASNLALTVVARR*

>peptide 2 (66 aa)
PRLVISDKRPVKDCDRACQHTLHWASSHALRHLGPEDGHGVELLLLRIQPSANGGSAAVIRALEGGG

Sequence

>CNT30721902
AACCTCGGTTGGTCATTTCTGACAAAAGACCAGTTAAGGATTGTGACAGGGCCTGTCAGCATACCCTTCATTGGGCGAGCAGTCATGCTCTGCGCCATCT
TGGACCAGAAGACGGTCATGGGGTTGAGCTTCTTTTGCTGCGCATCCAACCTAGCGCTAACGGTGGTAGCGCGGCGGTGATCAGAGCCCTTGAGGGCGGT
GGC