Detailed information on CNT30721822


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30689644Triticum speltaTriticum urartu73.1619.8299.65289forward
CNT30367120Triticum speltaSorghum bicolor47.5925.7595.21188forward
CNT30322845Triticum speltaAsparagus officinalis30.389.0385.83120forward

Expression of CNT30721822

SRR9114152: 7.77 RPKM

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MYLIPASAICFQMLALRSVATFSKSSALLLPSQKDSRANLSSLLGPMRGYPTMWDAIFLHK*

>peptide 2 (77 aa)
LVRVCGNISEVGEGVAGDVLDPSISHLLPDAGPEVGGNLLQILSAALAIPERLQGKLELPLGAHARVSDNVGRHLSA*

Sequence

>CNT30721822
CTTGTACGAGTCTGCGGGAACATCAGCGAAGTAGGAGAAGGTGTTGCTGGGGATGTACTTGATCCCAGCATCAGCCATCTGCTTCCAGATGCTGGCCCTG
AGGTCGGTGGCAACCTTCTCCAAATCCTCAGCGCTGCTCTTGCCATCCCAGAAAGACTCCAGGGCAAACTTGAGCTCCCTCTTGGGGCCCATGCGCGGGT
ATCCGACAATGTGGGACGCCATCTTTCTGCATAAATAATAGAATTAGAATCAGCTTGATCCAGCTAAGAGAGTTAGGATCTTGCAACTGAGACTATGGAT
CTCTATAATTTAAACGTAACCTGAAGAAAACTAACTTACAAAATAAAAAAATTCAGTAACAATTTTCTGCAAGCAACTAACTAGAAACATAGTGA