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Detailed information on CNT30721805


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT008675, E-value = 2e-73

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692292Triticum speltaOryza sativa16.5530.9694.14239forward
CNT30316649Triticum speltaCorylus avellana14.1359.6587.75204forward
CNT30518292Triticum speltaJuglans regia14.5445.7588.57210forward
CNT30380105Triticum speltaManihot esculenta1638.5689.18231forward
CNT30630601Triticum speltaVigna unguiculata13.4327.1387.63194forward
CNT30287202Triticum speltaTriticum aestivum16.5533.2494.56239forward
CNT30387906Triticum speltaTriticum turgidum16.5524.6494.14239forward
CNT30540416Triticum speltaBrassica napus15.7261.6887.67227forward
CNT30248159Triticum speltaAvena sativa16.221.3790.17234forward
CNT3015474Triticum speltaZea mays16.2740.8789.79235forward
CNT30350899Triticum speltaEragrostis tef16.5521.4292.47239forward
CNT30424894Triticum speltaPapaver somniferum16.2731.5987.66235forward
CNT30706378Triticum speltaPrunus avium15.7920.1891.23228forward
CNT3024873Triticum speltaPopulus trichocarpa14.0635.9990.15203forward
CNT3037774Triticum speltaCucumis melo13.2324.7189.53191forward
CNT30147611Triticum speltaBrachypodium distachyon11.222795.06162forward
CNT30101053Triticum speltaOryza rufipogon16.5528.7693.31239forward
CNT30585575Triticum speltaEchinochloa crusgalli16.2745.9989.79235forward
CNT30496962Triticum speltaDigitaria exilis16.5521.2691.63239forward
CNT30594546Triticum speltaEragrostis curvula16.5550.5390.79239forward
CNT30603788Triticum speltaOryza punctata16.4120.1292.41237forward
CNT30176058Triticum speltaVigna angularis15.5124.8186.61224forward
CNT3050518Triticum speltaCucumis sativus12.629.3187.36182forward

Expression of CNT30721805

SRR9114152: 2.81 RPKM

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MVIPLSRSAFSLSSTQAYLKDLLFISAASFSNLSITRLSIPPSL*

>peptide 2 (44 aa)
MAGDLKLFETTDNESRQRRGADRDAHLGGRRRNRAEAAAGMGDWE

>peptide 3 (39 aa)
MRLDLLGRFTATKQVHQREAEPRTQLRENPSNNGRNRHA*

>peptide 4 (34 aa)
MAIFSLPMAEASKQKHQGKQMLEQQIQGIQVLTK*

>peptide 5 (31 aa)
QANKLQSNNLHFTTNQSQGHRSLAEAGIEIQ*

Sequence

>CNT30721805
ACAAGCTAACAAGTTGCAATCTAATAACTTGCATTTCACAACAAATCAGTCTCAGGGGCACAGGAGTTTAGCCGAAGCAGGAATAGAAATACAGTAATTA
AACGACAGACAGATCATTGCTCGCTCGGGATAAGAGTCTGAAGCAACAAAAGCAATGACCGTGAACAAAATCCTTCTGCAAGATAGCGCGCCTATTTCTT
CTTGATGGGGAAGACGCAGGGGCTTGTCTGAGGGCCTCTTGGGCTCATTGATCTGGTCAAGAGCCTCAAGAAGGGTAGGGCCCTTGTACCAGTCAAGGTT
GGTGGACCTCTCAATCATGTTGTCACCCTCAAACCCAGAGATGGGAACAAAGGGAACCTTCTCAGGGTTGTAGCCAACCTTCTTCAGGTACGATGAGACT
TCCTTGACAATTTCCTCGTAACGGGCCTTTGAGTACTTGGGAGTGTCACGGTGACCAGGGGCGTCAATGACGGTGCAGTAGTACTTGGTGGTCTCGAACT
TCCACAGGGCAATATCAATGGTGATACCCCTCTCACGCTCGGCCTTCAGCTTGTCAAGCACCCAGGCGTACTTGAAAGACCTCTTGTTCATCTCAGCGGC
TTCCTTCTCAAACCTCTCGATCACACGCTTGTCAATACCTCCAAGCTTGTAGATCAGATGGCCATCTTCTCCTTGCCCATGGCTGAAGCTAGCAAACAGA
AACATCAAGGTAAGCAGATGTTAGAACAACAGATCCAAGGGATCCAAGTGTTAACAAAGTAATATCTTGTCTATTTGTGAGGTCAACAGACAAGTAGAAG
AAGCGTTTAACGAGATGGAATTACACTAGAAGCAGTCAGACTGCAGGTACTTATTAGATCTACGAATTACTGCAGTGATAACGCTAACAAAATTCACCAT
ACAAGTACATGAAGTTTATGCAGTAAACTCTCAAAGAGAAGTCTCCTAGAGAGCTCACAGATCCTACAGAACCCTAAGTACTATACGAATCCATCTAACA
ATACATGCAACAAGGCACGGAGATGATTCAGGGACATCTCGCGAGACCAAATCGGTAACAGAAACAGTAAAAACCTACAGATCAAGGCTACGGCATGAGG
TAGTCATCAGAATTGAAGACAAAAAAAGACATGCGGCTAGATCTACTCGGGAGATTCACCGCTACTAAGCAGGTGCACCAGCGCGAAGCCGAACCGAGGA
CTCAGCTTCGAGAAAATCCGTCAAACAACGGACGAAATCGACATGCATAACCGCAAAAAGAGCCTAAAACTCGATCTACCCGCACGCCACAGCCACCGCA
CACAAACATGGCCGGAGATCTGAAGCTATTCGAGACCACGGACAACGAATCGAGGCAGAGAAGGGGGGCGGATCGGGATGCTCACCTCGGAGGAAGGAGA
AGGAACCGAGCGGAGGCGGCGGCGGGGATGGGGGACTGGGAGGA