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Detailed information on CNT30721658


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6VAG0|TBA2_GOSHI, E-value = 2e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694759Triticum speltaOryza sativa43.8636.6285.16182forward
CNT30678132Triticum speltaSetaria viridis58.3133.8992.56242forward
CNT30522101Triticum speltaSetaria italica50.3619.7293.3209forward
CNT30517675Triticum speltaJuglans regia50.1234.4483.65208forward
CNT30727923Triticum speltaCorchorus capsularis50.3617.6586.12209forward
CNT30403515Triticum speltaBeta vulgaris47.2376.2687.24196forward
CNT30710214Triticum speltaGlycine max43.3759.2183.89180forward
CNT30177336Triticum speltaSecale cereale49.417.8996.1205forward
CNT30297012Triticum speltaTriticum aestivum51.3339.08100213forward
CNT30237104Triticum speltaBrassica oleracea43.1355.2585.47179forward
CNT30555279Triticum speltaOryza glaberrima50.3666.9990.91209forward
CNT3059767Triticum speltaArabidopsis lyrata35.921.0286.58149forward
CNT3075316Triticum speltaBrassica juncea46.7565.3286.6194forward
CNT30265527Triticum speltaBrassica rapa49.433.2884.88205forward
CNT30611949Triticum speltaArabis alpina27.7133.2489.57115forward
CNT30228Triticum speltaZea mays46.5125.7791.19193forward
CNT30606894Triticum speltaGossypium raimondii50.1256.9983.17208forward
CNT30210906Triticum speltaHelianthus annuus33.4953.2681.29139forward
CNT30361562Triticum speltaSorghum bicolor46.5119.5191.19193forward
CNT30597159Triticum speltaOryza meridionalis50.1228.7391.35208forward
CNT30106559Triticum speltaOryza longistaminata26.0248.2188.89108forward
CNT3024757Triticum speltaPopulus trichocarpa50.1279.6984.13208forward
CNT30331419Triticum speltaDioscorea rotundata37.1154.882.47154forward
CNT30147962Triticum speltaBrachypodium distachyon48.9259.8892.12203forward
CNT30575645Triticum speltaOryza barthii50.3624.6591.39209forward
CNT30117847Triticum speltaOryza nivara50.3622.3190.91209forward

Expression of CNT30721658

SRR9114152: 12.27 RPKM

Sequence

>CNT30721658
TGGTGTAGGCAAACCAGATAACATGCATATTGACCAAGGTGCGAAGCAGGTTCAAACATACCACAGGTTGTAAACCAAACACCACACAGCAAACATTCAA
ACAGACAGACAGCAGATAAAGCCACTCGGGCAGATCACACGAAGGAACGCTTGGCGTACATCAGGTCGAACTTGTGGTCAATGCGGGAGAAGACCTCGAC
AACGCTGGTGGAGACCTGAGGAGATGGGTACACTGTGAACCCAAGCTTGGACTTCTTTCCATAGTCAACAGAGAGACGCTCAAGGAGGAGAGAACCAAGG
CCAGAGCCAGTTCCACCTCCAACAGCGTTGAAGACAAGGAATCCCTGGAGACCAGTGCAGTTGTCTGCAAGCTTCCTGATACGGTCAAGGCATAGGTCAA
CAATCTCCTTGCCAA