CANTATAdb - search

Detailed information on CNT30721631

BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 6e-14

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30696398	Triticum spelta	Oryza sativa	13.85	100	98.54	481	forward
CNT30670969	Triticum spelta	Setaria viridis	29.25	89.04	99.7	1016	reverse complement
CNT30524649	Triticum spelta	Setaria italica	49.29	51.94	98.71	1712	forward
CNT30641383	Triticum spelta	Nymphaea colorata	40.74	45.29	94.13	1415	forward
CNT30550219	Triticum spelta	Ipomoea triloba	40.6	32.47	97.66	1410	forward
CNT30702366	Triticum spelta	Quercus lobata	28.68	100	98.19	996	reverse complement
CNT30378673	Triticum spelta	Arabidopsis thaliana	20.73	57.74	96.11	720	reverse complement
CNT30619000	Triticum spelta	Sesamum indicum	28.51	32.41	94.34	990	forward
CNT30283003	Triticum spelta	Chenopodium quinoa	25.89	94.14	97.33	899	reverse complement
CNT30730481	Triticum spelta	Corchorus capsularis	31.93	90.16	94.5	1109	reverse complement
CNT30632346	Triticum spelta	Vigna unguiculata	39.33	48.84	97.36	1366	forward
CNT30490123	Triticum spelta	Olea europaea	15.15	30.21	96.96	526	forward
CNT30505560	Triticum spelta	Nicotiana attenuata	40.05	62.91	96.98	1391	reverse complement
CNT30157603	Triticum spelta	Pistacia vera	21.45	78.09	90.34	745	forward
CNT30185187	Triticum spelta	Secale cereale	100.03	98.22	99.57	3474	forward
CNT30299053	Triticum spelta	Triticum aestivum	90.84	88.05	99.24	3155	forward
CNT30223648	Triticum spelta	Hordeum vulgare	61.22	89.52	95.95	2126	forward
CNT30394721	Triticum spelta	Triticum turgidum	100.03	94.84	99.54	3474	forward
CNT30569655	Triticum spelta	Actinidia chinensis	40.48	39.48	96.8	1406	forward
CNT30543268	Triticum spelta	Brassica napus	34.21	51.76	95.12	1188	forward
CNT30555751	Triticum spelta	Oryza glaberrima	12.27	59.75	97.42	426	reverse complement
CNT30147396	Triticum spelta	Medicago truncatula	39.76	46.42	97.25	1381	forward
CNT30439575	Triticum spelta	Aegilops tauschii	40.6	100	99.65	1410	reverse complement
CNT30670388	Triticum spelta	Triticum dicoccoides	80.74	100	99.18	2804	forward
CNT30140120	Triticum spelta	Lolium perenne	82.46	86.24	98.88	2864	forward
CNT3017956	Triticum spelta	Zea mays	54.16	53.33	97.29	1881	forward
CNT30605068	Triticum spelta	Gossypium raimondii	33.34	75.79	96.72	1158	reverse complement
CNT30216563	Triticum spelta	Kalanchoe fedtschenkoi	39.48	35.25	97.67	1371	forward
CNT30655407	Triticum spelta	Rosa chinensis	40.28	41.85	97.07	1399	forward
CNT30207637	Triticum spelta	Helianthus annuus	28.53	50.66	95.56	991	forward
CNT30628241	Triticum spelta	Daucus carota	37.66	48.44	98.47	1308	reverse complement
CNT30688989	Triticum spelta	Triticum urartu	56.06	98.98	99.69	1947	forward
CNT30346087	Triticum spelta	Eragrostis tef	24.42	82.01	99.53	848	forward
CNT30360996	Triticum spelta	Lactuca sativa	27.87	66.35	96.8	968	forward
CNT30429739	Triticum spelta	Papaver somniferum	37.52	40.5	93.71	1303	forward
CNT30571858	Triticum spelta	Vitis vinifera	41.43	41.52	97.57	1439	reverse complement
CNT3056076	Triticum spelta	Amborella trichopoda	33.8	51	92.5	1174	forward
CNT30108930	Triticum spelta	Oryza longistaminata	45.52	67.56	98.92	1581	forward
CNT3038324	Triticum spelta	Cucumis melo	37.86	69.72	97.19	1315	reverse complement
CNT30499372	Triticum spelta	Digitaria exilis	53.53	54.69	98.49	1859	forward
CNT30603680	Triticum spelta	Oryza punctata	54.07	47.58	98.88	1878	forward
CNT30557400	Triticum spelta	Panicum hallii	18.86	47.74	97.71	655	forward

Expression of CNT30721631

SRR9114152: 118.52 RPKM

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MKVVRELGLERRETVRFLSTVGVKGRTARSQP*

>peptide 2 (33 aa)
MMSVARGRALNGLGWPPFRFTNPRETPNTGRHP*

>peptide 3 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 4 (84 aa)
MSAKAVALPYTRIRFLAGADTDFSLKAKKKKWANTRPSGRTCRLRLRAPADTFRSTFTCEPKSSCRTPSFLISVLAFFIFRRGL*

>peptide 5 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMSQGSSDSPKRRDLERSFFKCQ*

>peptide 6 (55 aa)
NHALDGCPGIEKEGRFQRRKAMGRDFSVIHGSPIGKPYPSSVASLRSLDFSNLAN*

Sequence

>CNT30721631
AAAATCATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAGATTTTTCTGTGATCCATGGATCTCC
GATCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGGAAAATC
AACCGAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGAACAAGGGTTTTCATCAAAAGAAATCCGAAGCGGTTTCATTCGATTTGTTGTGGATTGGATGAT
GGAAAAACCAGCAAGCAGCAAGCGTAGTTAGAAAAGTTGCCGTAGCGCGCCCTACGGAGTTGTACAAAGTCAGCAACCGTTTTGGGGCGCAAGCATAGGC
AACACAGGACTGATGATGGGGTGGGGCGCGCAGTGAACTGGTTTTCTAAAAAGATTGGAAGATCCGGCCAAAGAAGGTGATAGCCCTGTTCATTCGTTCC
CATGGTTCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATGATGATTGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATG
ACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCCAATCGGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGA
GCGGAGCGCGGGCGCACTCACTCTAACGGCGTACCTTTCGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTC
CAGAGGTGGAAGATTTACGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAAC
CCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAG
CGTATGATGTCGGTGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGCCGTCATC
CTTAGTACAGACAGACTGATTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAG
GAAGTGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAAT
GTCTCAGGGCTCAAGTGATTCACCGAAGCGACGAGACCTTGAAAGAAGCTTTTTCAAGTGTCAGTAGCGGGACGTTCTGTCAATCGGGGAAGGTTTTTGG
TGACAAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAGAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGCTTTCTGCGTTC
AGTCAATCTACGCAGAGTGAATCGGTCCCTAAGGAACCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACTGAACC
ATGCCTGGATCGTCGGAGCGAATTGGATGATCGGGCCGAGGGCTGCCCCCTCTTCCCCTCGCTCTCCTTTCCTTAATATTCACCGTCGAGTCATCAAAGC
CGTCAACTAATTCAGAGGGGCTCGGCTGGCCCGGTCGCCTACGCTACTGGCGCTTCCAAAGGCGAAGCTCTCGTCTTTGGCGACCAGCAAACGGAGGGCT
AAAACCTGTAGTTTTGAAGCAAGGGATGAGCGCGAAAGCCGTTGCGCTTCCGTACACGCGCATACGTTTTCTTGCTGGGGCGGACACGGATTTCTCTCTA
AAGGCGAAGAAAAAGAAGTGGGCGAACACTCGGCCCAGCGGGCGAACATGCCGGCTCCGGCTCCGCGCACCTGCTGACACCTTTCGAAGCACTTTCACGT
GTGAACCGAAGTCGTCTTGCCGAACTCCTTCCTTTCTCATTTCAGTCCTCGCCTTTTTCATCTTCCGTAGGGGCCTTTAGTCTTTTGATTAGAGTGGAGG
TCGCGAGAGAGCAGAGCGTACCGCCCTGCCATAGTCGCGAGGATCTTAATAGTCGGTCGCGACTGTTGTCATAGTCAACGACGGTTGAAACTTCCAGGAA
AAAACTTCGAATTGGGAGGGCGATCCTCCCGGTGAACTGACCGTACCCTAAACCGATACAGGCGAACAAGTAGAGTATACTAGGGCGCGTCGAGAGAACC
ATGTCGAAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACT
GTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTGATAAGCTT
TGAATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTAACTGTCCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGA
CTGCCCCGCTGTCTCCGACATGGACCCGGTGAAATTGAATTCTCCGTGAAGATGCGGAGTACCAACGGCTAGACGGTAAGACCCCGTGCACCTTGACTAT
AGCTTCGCAGTGACAACCTTGATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAACGACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCC
TAACCGCCGCACCGATCATTCGGGGGGGGCGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGT
AGGCTCAAGCGTTGATTCTGCTCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCC
GGGAGTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATAACAGGCTGATGACTCCCAAGAGCTCTTATCGACGGAGTCGTTTGG
CACCTCGATGTCGACTCATCACATCCTGGGGTTGAAGAAGGTCCCAAGGGTTCGGTTGTTCGCCGATGAAAGTGGTACGTGAGTTGGGTTTAGAACGTCG
TGAGACAGTTCGGTTCCTATCTACCGTTGGTGTTAAAGGGAGAACTGCGAGGAGCCAGCCCTAGTACGAGAGGACTGGGCTGGGTCAACCTATGGTGTAC
CGGTTGTTATGCCAATAGCAGCGTCGGGCAGCTAAGTTGGTATGGAAGAACTGCTGCGCCGCGGGAAATCCTTCTCTATACAAGTTCTCGTACGAGGTTT
TTGAACAGAACTTCGATAGGCGAGAGGTGTAAGCACCGCGAGGTGTGAAGCGATCTCGTACTAAACGAATGGA