Detailed information on CNT30721383


BLAST search results

BLAST vs Swiss-Prot:
sp|P33629|TBA_PRUDU, E-value = 4e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30383102Triticum speltaTriticum turgidum10092.1594.81270forward

Expression of CNT30721383

SRR9114152: 0.81 RPKM

Peptides detected in this lncRNA

>peptide 1 (88 aa)
NEPIEVGVCWALNVKGAAADVIDGLIVKEDSHISLLRVEELAVSASPHLINHSGLKINKDRAGDMLPSTSLTEEGVESIITSPNGLVTG

>peptide 2 (64 aa)
MLGAQCQGSGGRCHRWPHCQGGQPHQSAQGGRAGGKCQSSPHQSQWAQDQQRPRGGHASQHQSH*

Sequence

>CNT30721383
AAACGAGCCTATTGAGGTTGGTGTATGTTGGGCGCTCAATGTCAAGGGAGCGGCGGCAGATGTCATAGATGGCCTCATTGTCAAGGAGGACAGCCACATC
AGTCTGCTCAGGGTGGAAGAGCTGGCGGTAAGTGCCAGTCCTCACCTCATCAATCACAGTGGGCTCAAGATCAACAAAGACCGCGCGGGGGACATGCTTC
CCAGCACCAGTCTCACTGAAGAAGGTGTTGAAAGCATCATCACCTCCCCCAACGGTCTTGTCACCGGGCA