Detailed information on CNT30720485


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30592666Triticum speltaMusa acuminata20.066.4790.4863forward
CNT30555029Triticum speltaOryza glaberrima27.3917.0698.8486reverse complement

Expression of CNT30720485

SRR9114152: 0.0 RPKM

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MHGAVLALPSQDRSHTCHVRDRPPQLCIDRKAGRQSPQPTGVVTSSMSPLDSRHAMIPQGG*

Sequence

>CNT30720485
ATGCATGGCGCCGTCTTAGCCTTGCCTTCCCAGGATCGCTCCCACACCTGTCACGTTCGTGATCGGCCTCCTCAACTGTGTATCGATCGAAAGGCAGGGC
GGCAGAGCCCCCAACCGACGGGAGTAGTTACGTCCAGTATGTCCCCCCTCGATTCCCGACATGCTATGATACCCCAGGGTGGGTAGGAGCGGGTCGAGTC
CGTATCACCGCGGAACAACTGCAGCGTCCGGATCTGATCTATCTACTCGGCAATTCATCCGGTGACTTCACGGTCGCCAAAGAAGCCCCAAGAAGCATCA
AACATTTCCGATGA