Detailed information on CNT30720356


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONVVIT003033, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30592527Triticum speltaMusa acuminata48.4656.5998.41189reverse complement

Expression of CNT30720356

SRR9114152: 92.56 RPKM

Peptides detected in this lncRNA

>peptide 1 (30 aa)
VIARSLPFPLSDCLGTLAYDLGCFPLDFGS*

Sequence

>CNT30720356
TGTCATCGCTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCTGTTTCCCTCTCGACTTTGGATCTTAGCACCCA
ATCAGTCTGTCTGTACTAAGGATGACGGCCTGTATTCGAAGTTTCCCTGGGGTTGGTAAAGCGAAATGGGGGCCACCCTAGCCCATTGAGTGCTCTACCT
CGGGCCATCGACATCATACGCTCTACTGAAATAGATTTCGCGGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCC
GTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTCTCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTCA