Detailed information on CNT30720298


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676816Triticum speltaSetaria viridis50.2350.2397.3111forward
CNT30304119Triticum speltaTriticum aestivum91.865899.51203reverse complement
CNT30220156Triticum speltaHordeum vulgare52.499.22100116reverse complement
CNT30391503Triticum speltaTriticum turgidum26.2411.610058reverse complement
CNT30590093Triticum speltaMusa acuminata33.4812.1186.4974reverse complement
CNT30256662Triticum speltaAvena sativa27.65.6793.4461reverse complement
CNT30447572Triticum speltaSaccharum spontaneum10012.8495.48221reverse complement
CNT30649878Triticum speltaRosa chinensis35.2935.6291.0378reverse complement
CNT30684618Triticum speltaTriticum urartu78.2818.1598.27173reverse complement

Expression of CNT30720298

SRR9114152: 0.0 RPKM

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MENCIFGICNNAMGERRELNPRMVDSQSTALIHLATSAPYPAKGFFSFFH*

Sequence

>CNT30720298
ATGGAAAATTGCATTTTTGGAATTTGCAATAATGCGATGGGCGAACGACGGGAATTGAACCCGCGCATGGTGGATTCACAATCCACTGCCTTGATCCACT
TGGCTACATCCGCCCCTTATCCAGCTAAAGGATTTTTTTCTTTTTTCCATTGATCATTATTCTATTTATTCTGACCTCCGTACTTCGATCGAGATATTGG
ACATAGAATGCCACTCTTTAA