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Detailed information on CNT30720263


BLAST search results

BLAST vs Swiss-Prot:
sp|P68430|H32_ONOVI, E-value = 4e-74

BLAST vs NONCODE:
NONBRAT001321, E-value = 9e-30

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523795Triticum speltaSetaria italica52.249.7693.51308forward

Expression of CNT30720263

SRR9114152: 162.48 RPKM

Peptides detected in this lncRNA

>peptide 1 (32 aa)
RTDSNIFISVTDDSKMVTSEQTHYIDHDTNKH*

>peptide 2 (31 aa)
MRRASWMSLGMMVTRLAWMAQRLVSSKRPTR*

>peptide 3 (82 aa)
MSSSVLFWYLRISRRATVPGRKRWGFLTPPVAGADLRAALVASCFLGALPPVDFLAVCLVRAMESEMRGRLRRFGGLLGGMGV

Sequence

>CNT30720263
TTAGAACAGATAGCAACATTTTCATTTCAGTTACTGATGACAGCAAGATGGTGACATCAGAACAGACACACTACATCGACCACGACACGAACAAACACTA
GCACGCACATTTCCACCGATGAACACATCAGGCTAAGAGGACGACTAACAGACGACGACGAACAGAGCTTAGGCCCTCTCTCCACGGATGCGGCGGGCGA
GCTGGATGTCCTTGGGCATGATGGTGACGCGCTTGGCGTGGATGGCGCAGAGGTTGGTGTCCTCGAAGAGGCCCACCAGGTAGGCCTCGGCGGCCTCCTG
CAGGGCGGAGACGGCGGAGGACTGGAAGCGGAGCTTGCGGATGAGCAGCTCGGTGCTCTTCTGGTACTTGCGGATCTCGCGGAGGGCGACGGTGCCGGGG
CGGAAGCGGTGGGGCTTCTTGACGCCGCCTGTGGCCGGGGCGGACTTGCGGGCGGCCTTGGTGGCCAGCTGCTTCCTCGGCGCCTTGCCGCCGGTGGACT
TCCTCGCCGTCTGCTTGGTGCGGGCCATGGAGTCGGAGATGCGCGGGAGGCTGAGGAGATTTGGGGGATTGCTGGGAGGAATGGGGGTGA