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Detailed information on CNT30720257

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30286709	Triticum spelta	Triticum aestivum	91.53	69.85	100	454	forward
CNT30384527	Triticum spelta	Triticum turgidum	17.94	33.84	88.76	89	reverse complement

Expression of CNT30720257

SRR9114152: 4.87 RPKM

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MSYGQSVAAGCPAGDEKKTSWSELVGKSIVEAREIILKDMPDADCGNGGLEEQPCPHLRRHCRDHTSHWLAS*

>peptide 2 (39 aa)
MQVLVSVKFRVSSIEFHLAARTIEDELWPECRRRMPGRR*

Sequence

>CNT30720257
ATCTCCCCTATAAATAGACATAGATGATGCAATGAGTTATGCAAGTACTCGTCTCGGTCAAGTTCAGAGTAAGCTCCATCGAGTTCCATTTAGCTGCTCG
CACAATTGAGGATGAGCTATGGCCAGAGTGTCGCCGCCGGATGCCCGGCCGGAGATGAGAAGAAGACGTCATGGTCGGAGTTAGTGGGGAAGTCTATCGT
AGAGGCCAGAGAGATCATCCTCAAGGACATGCCTGATGCGGACTGCGGTAACGGAGGACTTGAGGAGCAACCGTGTCCGCATCTTCGTCGACACTGTCGC
GACCACACCTCACATTGGCTAGCTAGCTAGCTTTGCTCGCTAGGAGCGACGTGCATGCGTCAGGCGTCACGGATGCTGATGACCAAGTAATAATTTTCAA
TAATGGATGCATAAGTACATGCTCGACGGATCATCCTACTTTTGTGTTTGGGTTATGGATCCATGTGCTCGACTGGTTAATTATTTGTAGTTTCCG