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Detailed information on CNT30720171


BLAST search results

BLAST vs Swiss-Prot:
sp|P68430|H32_ONOVI, E-value = 2e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628401Triticum speltaVigna unguiculata16.6131.8582.24107forward
CNT30435418Triticum speltaAegilops tauschii47.9871.8695.79309forward
CNT30358858Triticum speltaLactuca sativa18.0120.0784.48116forward

Expression of CNT30720171

SRR9114152: 36.89 RPKM

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRRASWMSLGMMVTRLAWMAQRLVSSKRPTR*

Sequence

>CNT30720171
CGAGTTGGAATAATATAATGCACAATTTGGTGAATCACATTCACTGACAGGCTCACAAACAAGCAAAAACAGGCATCAAAATGAACAGATCTTAGAACAG
ACCGCCAACATTTTCATTTAAATTACTGATGACAGCAAGATGGTGACATCAGATCAGGCACACTACATCCACCATGGCACAAACAAACACTACGAGCACG
CACATCTCGACCGCTGAACAACGGCTAAGGTGGATCTAACACACGACGACGCGCACGGAGCAGCCTAGGCCCTCTCGCCACGGATGCGGCGGGCGAGCTG
GATGTCCTTGGGCATGATGGTGACGCGCTTGGCGTGGATGGCGCAGAGGTTGGTGTCCTCGAAGAGGCCGACGAGGTAGGCCTCGGCGGCCTCCTGCAGT
GCGGAGACGGCGGAGGACTGGAAGCGGAGCGCGACGGTGCCGGGGCGGAAGCGGTGGGGCTTCTTGACGCCGCCGGTGGCCGGGGCGGACTTGCGGGCGG
CCTTGGTGGCCAGCTGCTTCCTCGGCGCCTTGCCGCCGGTGGACTTCCTCGCCGTCTGCTTGGTGCGGGCCATGGCTCGATGCGCCGGGAGGCTGAGGAG
GGAGGGGGAGGGGGTTCTGGTGCTTGAGGAGGAGGGATTGGGGT