Detailed information on CNT30720168


BLAST search results

BLAST vs Swiss-Prot:
sp|P06671|CB22_MAIZE, E-value = 3e-62

BLAST vs NONCODE:
NONBNAT007398, E-value = 1e-48

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30129909Triticum speltaCorymbia citriodora85.9535.3593257forward

Expression of CNT30720168

SRR9114152: 3.37 RPKM

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHRQWITSSSRFLAKVSGSADSPAVSHP*

>peptide 2 (98 aa)
GEGPGVVVDGVGEVVEAALAEDLGAGLEPHGLAELDAVAGEQLGEDAAERAQHGPPAVDHLQLPVLGEGLGVGRQPRGVPPVVAGELAGEVARGVAGER

Sequence

>CNT30720168
GGCGAAGGCCCAGGCGTTGTTGTTGACGGGGTCGGAGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGAGCCGGCCTTGAACCACACGGCCTCGCCG
AACTTGACGCCGTTGCGGGCGAGCAGCTCGGGGAAGACGCAGCCGAGCGCGCCCAGCATGGCCCACCGGCAGTGGATCACCTCCAGCTCCCGGTTCTTGG
CGAAGGTCTCGGGGTCGGCCGACAGCCCCGCGGTGTCCCACCCGTAGTCGCCGGGGAACTCGCCGGTGAGGTAGCTCGGGGGGTCGCCGGAGAGCGGGC