Detailed information on CNT30719929


BLAST search results

BLAST vs Swiss-Prot:
sp|P31753|RS27A_ASPOF, E-value = 2e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693384Triticum speltaOryza sativa36.4942.495.28212forward
CNT30285916Triticum speltaTriticum aestivum72.8169.23100423forward
CNT30553804Triticum speltaOryza glaberrima36.4935.1695.28212forward
CNT30656187Triticum speltaTriticum dicoccoides70.7461.2596.59411forward
CNT30175006Triticum speltaVigna angularis29.2632.9584.12170forward
CNT3050381Triticum speltaCucumis sativus26.6849.3687.1155forward

Expression of CNT30719929

SRR9114152: 0.0 RPKM

Peptides detected in this lncRNA

>peptide 1 (68 aa)
IFRDPTTLLRSAKHRIRKPTWDRLKAFGLIAYGHQNLSTHRTTAVCDEIFRKHDTQGFSLKDKRDTSK*

Sequence

>CNT30719929
ACATTTTTCGTGATCCCACCACCTTATTAAGATCAGCAAAGCATAGAATAAGAAAGCCGACATGGGATAGATTAAAAGCATTTGGACTGATAGCATACGG
ACACCAAAATTTAAGCACGCATCGCACTACAGCAGTATGCGATGAAATATTCAGGAAACATGATACTCAAGGTTTCAGTTTAAAAGACAAACGGGACACA
TCTAAATGAGTTCGATTCTCGATAGGTAGGTAAAAAGAGCAGAGCAAACGCGAGCCACCTCTAAGCCTTCTGGTTGTAGACGTAGGTGAGGCCGCACTTG
CCGCAGTAGTGGCGGTCGAAGTGGTTGGCCATGAAGGTGCCGGCGCCGCAGTCGGCGTTGGGGCACTCCTTCCTGAGCCTGGTCACCTTGCCGGTGGCGT
CGTCGACCTTGTAGAACTGGAGGACGGCGAGCTTCACCTTCTTGTGCTTGTGCTTTTGCTTCTTGGGCTTGGTGTAGATCTGCATCTTGGCGGCGGTGCG
AGGTCGCCTCCGCGCGCTGCGGCGGCGACGGCGGCGGCGGAGTAGGGTTTGGGTTAGGGGGCGGAGTGGAGGCTAGGGTTT