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Detailed information on CNT30719706


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT000710, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548750Malus domestica goldenIpomoea triloba94.6581.1494.991097forward
CNT30500634Malus domestica goldenCoffea canephora83.6185.2294.12969forward
CNT30619307Malus domestica goldenSesamum indicum94.8265.6195.721099forward
CNT30283076Malus domestica goldenChenopodium quinoa94.4879.9394.611095forward
CNT30730400Malus domestica goldenCorchorus capsularis94.7482.8195.631098reverse complement
CNT30639077Malus domestica goldenCapsicum annuum86.8960.2696.031007forward
CNT30311217Malus domestica goldenCamelina sativa92.1546.6895.131068forward
CNT3075790Malus domestica goldenBrassica juncea92.4981.7794.871072forward
CNT30653443Malus domestica goldenRosa chinensis9583.6694.911101forward
CNT30212627Malus domestica goldenHelianthus annuus83.8795.4895.88972forward
CNT30356344Malus domestica goldenLactuca sativa93.9647.4591.741089forward
CNT30574507Malus domestica goldenVitis vinifera9560.7696.091101forward
CNT30336076Malus domestica goldenCynara cardunculus86.4535.6793.311002forward

Expression of CNT30719706

Peptides detected in this lncRNA

>peptide 1 (36 aa)
TRMNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 2 (48 aa)
DAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

Sequence

>CNT30719706
TGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAG
AAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTGGGAGCCTCGCGGCGAAATTGAAATACCACTACTTT
TAACGTTATTTTACTTATTCCGTGAATCGGAGGCGGGGCATCGCCCCTCTTTTTGGAACCAAGGCCCGCTCGCGGGCCGATCCGGGCGGAAGACATTGTC
AGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGG
TAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAG
AAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCA
GAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGT
CGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTG
GATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCCTGCGCCCGCCGCCCGATTGCCGACCTGCAGTAGGGGCCCCGGCCCCCAAAG
GCTCATGTCGATGGCCTGGCCCTCGCGGCGGACGAGCCGCGGTGGCCGCCTTGAATCGTAATTCCCACCGAGCGGCGGGTAGAATCCTTTGCAGACGACT
TAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTGCGTCGCTTCGATTCGTCCCTCCCCCTTTCC
TCCCCGGCCCATCCTTTTTTGCAATTGTAATTCAACCTAGTTATAGAGGCACCGTTGAT