Detailed information on CNT3071936


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315005Quercus suberCorylus avellana58.517.8992.2141forward
CNT30518749Quercus suberJuglans regia35.2713.3990.5985forward
CNT30701804Quercus suberQuercus lobata56.0230.294.07135forward
CNT3047926Quercus suberPrunus dulcis30.7126.7186.4974reverse complement
CNT3085819Quercus suberVigna radiata36.936.7985.3989forward
CNT30171034Quercus suberTrifolium pratense30.2911.2186.373forward
CNT30652116Quercus suberRosa chinensis40.6614.6187.7698forward
CNT3026422Quercus suberPopulus trichocarpa28.6332.2488.4169forward

Expression of CNT3071936

Peptides detected in this lncRNA

>peptide 1 (58 aa)
AFKIEMIDLIHLIELMSKLDISCLLHPLEMIGMAWKAFVSIQLLLQAFLQLYSLKVDH*

Sequence

>CNT3071936
GCATTTAAAATTGAGATGATTGACTTGATTCACCTAATTGAATTGATGAGCAAGTTGGATATAAGTTGTCTCTTACATCCTCTAGAGATGATAGGAATGG
CTTGGAAGGCATTTGTGAGCATTCAACTTCTCCTTCAAGCATTTCTACAACTTTATTCATTGAAGGTCGATCACTAGGCTTCATTTGTATGCACCATAAT
GCAACTTTGATCATCTTCTTAATTTTTTCCTTCTCCCCCTT