Detailed information on CNT307193


BLAST search results

BLAST vs Swiss-Prot:
sp|P93276|M030_ARATH, E-value = 5e-24

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554477Zea maysOryza glaberrima10.1753.5397.93387reverse complement

Expression of CNT307193

Peptides detected in this lncRNA

>peptide 1 (44 aa)
ENHALDGCPGIEKEGRFQRRKAMGRESVCDPWISDRETVSKLHG*

>peptide 2 (47 aa)
MMEKPASSKRRLCCRSAPYGVVQSQQLFWGASIGNTGRGGARSEVVF*

>peptide 3 (40 aa)
MFFLFDPKPIDLAMSRLKRALTGLGGPNPRMWQNTGMTCG*

>peptide 4 (57 aa)
SKIMHWMDARALRRKDAFRGERPWGERASVIHGSPIGKPYPSSMASLRSLDFSNLAN*

>peptide 5 (48 aa)
MFQFRSLKIEFPWKNQGQLRSVSFNKRAERKGKNFFVNDHDFLKPSSL*

>peptide 6 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMSQGSSDSPKRRDLESCFFKCQ*

>peptide 7 (30 aa)
MPNRRTDHFIRGEGDTARWVVYLGRMPPKE*

>peptide 8 (36 aa)
MRPTGRTETKVGHSDPGVPCGRALAQRIKGTPGITG*

>peptide 9 (32 aa)
MKVVRELGLERRETVWFLSTVGVKGRTARSQP*

>peptide 10 (33 aa)
MMSMARGRALNGLGWPPFRFTNPRETPNTGCHP*

Sequence

>CNT307193
TCGAAAATCATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAGAGAGCGTCTGTGATCCATGGAT
CTCCGATCGGGAAACCGTATCCAAGCTCCATGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCAAACTGAAACATTTGAGTAGCTAAAGGAAGGAA
AATCAACCGAGACCCCGTTAGTAGCAGCGAGCGAGAGCGGAACAAGGATTTTCATCAAAAGAAATCCGAAGCGGTTTCATTTGATTTGTTGTGGATTGGA
TGATGGAAAAACCAGCAAGCAGCAAGCGTAGGCTGTGTTGCCGTAGCGCGCCCTACGGAGTTGTACAAAGTCAGCAACTGTTTTGGGGCGCAAGCATAGG
CAACACAGGACGGGGTGGGGCACGCAGTGAAGTGGTTTTCTAAAAAGATTGGAAGATCTAGCCAAAGAAGGTGATAGCCCTGTTCATTCGTTCCCATGGT
TCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATGATGATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGACTAAGTATTCCTCAATGACCGAT
AGCGTATAAGTACCGTGAGGGAAAGGTGAAAAGAACCCCAATCGGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGGAG
CGCGGGCGCACTCACTCTAACGGCATACCTTTCGCATGATGGTTCAACGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCTAGAGG
TGGAATGGAAGATTTATGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACC
CACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGTGAAATCTATTTCAGTAGAGC
GTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGCTGTCATCC
TTAGTACAGACAGGCCGATTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGG
AAGTGATCAAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGTGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATG
TCTCAGGGCTCAAGTGATTCACCGAAGCGACGAGACCTTGAAAGCTGCTTTTTCAAGTGTCAGTAGCGGGACGTTCTGTCAATCGGGGAAGGTTTTTGGT
GACAAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAGAAATCCTGTGAAAACACGATCGCCTGCCAGTGAAAGGCTTTCTGCGTTCAT
TCAATCTACGCAGAGTGAATCGGTCCCTAAGGAACTCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACTGAACCAT
GCCTGGATCGTCGGAGCGAATTGGATGATCGGGCCGAGGGCTGCCCCCTCTTCCCCTCGCTCTCCTTTCCTTAATATTCACCGTCGAGTCATCAAAGCCG
TCAACTAATTCGGAGGGGCTCGGCTGGCCCGGTCGCCCTACGCTACTGGCGCTTCCAAAGGCGAAGCTCTCGTCTTTGGCGACCAGCAAAGCAAACGGAG
GGAGGGCTAAAACCTTTTGTTTTGAAGCAAGGGATGAGCGCGAAAGCCGTTGCGCTTCCGTACACGCGCATACTCTTGCTCCGTCGCGCGTTAGGTTAGG
TTAGTACTTAGTACTTAACTTAGTACAATAACGCGCAGCCGTTTTGGGCGGACACGGTTCTCTAAAGGCGAAGACTCTGAAGTGGTCGAACACTCGGCCC
AGCGGGCGAACATGCCGGCTCCGGCTCCGCGCACCTGCTGACACCTTTCGAAGCACTTTCACGTGTGAACCGAAGTCGTCTTGTCCTTCCTTTCTCATTT
CAGTCCTCGCCTTTTTCATCTTCCGTAGGGGCGGGCCTTTAGTCTTTTGATTAGAGTAGAGGTCGCGAGAGAGATGAGCGTACCGCCCTGCCATAGTCGC
GAGGATCTTAATAGTCGGTCGCGACTGTTGTCATAGTCAACGACGGTTTAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCCTCCCGGTGAACT
GACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCGTCGAGAGAACCATGTCGAAGGAACTCGGCAAAATGACCCTGTAACTTCG
GGAGAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACAC
GATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTGATAAGCTTTGAATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTAA
CTGTCCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCAGTGAAATTGA
ATTCTCCGTGAAGATGCGGAGTACCAACGGCTAGACGGTAAGACCCCGTGCATCTTGACTATAGTTTCGCAGTGACAACCTTGATCGAATGTGTAGGATA
GGTGGGAGGTGGTGACACACAACGACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGCACCGATCATTTCATTCGGGGGGAGGGGG
ACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCGTTGATTCTGCTCGTGAGCGTAA
TGGTATAAGCCTGCCTGACTATGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCCCGTGTGGAAGGGCTCTCGCTCAACG
GATCAAAGGTACGCCGGGGATAACAGGCTGATGACTCCCAAGAGCTCTTATCGACGGAGTCGTTTGGCACCTCGATGTCGACTCATCACATCCTGGGGTT
GAAGAAGGTCCCAAGGGTTCGGTTGTTCGCCGATGAAAGTGGTACGTGAGTTGGGTTTAGAACGTCGTGAGACAGTTTGGTTCCTATCTACCGTTGGTGT
TAAAGGGAGAACTGCGAGGAGCCAACCCTAGTACGAGAGGACTGGGTTGGGTCAACCTATGGTGTACCGGTTGTTATGCCAATAGCAACGCCGGGCAGCT
AAGTTGGTATGGAAGAACTGCTGCGCCGCGGGAAATCCTTCTCTATACAAGTTCTCGTACGAGGTTTTTGAACAGAACTTCGATAGGCGAGAGGTGTAAG
CACCGCGAGGTGTGAAGCGATCTCGTACTAAACGAATGGAACTTTCCAACCTGTTATGGCTAAACTCGAGAATGGCATTGTTGATCTAGTTACGTTTGTA
ATTGTGCTGTGTTCAGTCTAGCGAAGATGTTTCAGTTCCGTTCTCTAAAGATAGAGTTTCCTTGGAAAAACCAAGGCCAGTTGAGATCAGTCTCTTTCAA
CAAAAGAGCGGAGCGGAAAGGAAAAAACTTTTTCGTCAATGATCACGACTTTCTTAAACCTTCCTCCCTTTGATAAAGGTTTGGTATTTTTCGGTTCTAT
TTTT