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Detailed information on CNT30718598


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3047786Malus domestica goldenPrunus dulcis54.8325.8790.85142reverse complement
CNT30157743Malus domestica goldenPistacia vera101.1654.9388.17262reverse complement
CNT30561659Malus domestica goldenActinidia chinensis31.6621.0885.3782forward
CNT30587644Malus domestica goldenMusa acuminata37.0726.4592.7196reverse complement
CNT30607450Malus domestica goldenGossypium raimondii102.3217.8681.89265forward
CNT30622828Malus domestica goldenDaucus carota62.1617.7988.82161reverse complement
CNT30620564Malus domestica goldenCajanus cajan99.234.9782.49257reverse complement

Expression of CNT30718598

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MFARGNCGLSGESMTASLMHLLVHLRIINWIVVNSPRLWNKGLSRAYAKVLMVIPKYRRTECDTMR*

Sequence

>CNT30718598
GTACAAGTATTAGTAACATAGCAAAAATGCGTTCCTCATCATTAATATGTTTGCTCGCGGTAATTGTGGCCTCTCGGGCGAATCGATGACTGCATCTTTG
ATGCACTTGCTGGTACATCTGAGAATTATTAATTGGATAGTTGTAAATAGCCCCAGACTGTGGAACAAAGGATTATCCCGGGCCTACGCCAAGGTATTGA
TGGTGATTCCCAAATATCGCAGAACAGAATGTGATACGATGAGATAGAATCCAATAGAA