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Detailed information on CNT3071844


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FJF6|SAU23_ARATH, E-value = 1e-32

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30729168Quercus suberCorchorus capsularis27.9211.5780.61165forward
CNT30525736Quercus suberPhaseolus vulgaris19.9723.8482.2118forward
CNT30159319Quercus suberPistacia vera24.0355.9180.28142forward
CNT3090059Quercus suberSolanum tuberosum26.2320.4281.29155forward
CNT30560988Quercus suberActinidia chinensis25.8928.4984.31153forward
CNT3087148Quercus suberVigna radiata20.6420.6181.97122forward
CNT30542807Quercus suberBrassica napus8.2924.1489.849forward
CNT30508403Quercus suberSolanum lycopersicum16.7536.1382.8399forward
CNT30171686Quercus suberTrifolium pratense20.1415.8283.19119forward
CNT30655496Quercus suberRosa chinensis17.2635.4283.33102forward
CNT30410040Quercus suberPapaver somniferum16.9223.8782100forward
CNT30570130Quercus suberVitis vinifera2242.0781.54130forward
CNT30644712Quercus suberCannabis sativa18.128.6183.18107forward
CNT3037105Quercus suberCucumis melo31.8163.379.79188forward
CNT30174654Quercus suberVigna angularis19.4622.3381.74115forward
CNT30113474Quercus suberFicus carica24.0311.9381.69142forward
CNT3049120Quercus suberCucumis sativus17.0922.884.16101forward

Expression of CNT3071844

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLKSIIYWVYHYSSLLQKIIKILEDCSMFFFS*

>peptide 2 (41 aa)
MKDGSSMIWEPQTAFFGFLPHTLQCGLSEHQTDFLCGWSAV*

Sequence

>CNT3071844
AAGATTTGAAATGAGAGAAAAATTTTATTTCTAAATGATTTTGTGGAAGAGCAATTTTCTCTTGCCCACTCATTTACATGTTGAAAAGTATCATATATTG
GGTTTACCACTACTCTAGTCTACTACAAAAGATTATCAAAATTTTGGAAGATTGCTCTATGTTCTTCTTTTCATGAAGCATGCAATTGAGAAGTGAGATT
GATGAAGGCGTCCTCTTTGCATGGAATCGTTAGACCACCCATTGGATGATTGAATCCAAACTCTTCCTCAGCTCGTTTAAGCAGGTCTTGGAATGAAGGA
TGGTTCAAGTATGATATGGGAACCACAAACCGCTTTCTTTGGATTTCTCCCACATACACTGCAATGTGGCCTTTCGGAACATCAGACTGATTTCTTGTGT
GGATGGAGTGCAGTTTGAGAAGTTGCTTGGCATTGGCAATCATAGATAGCATACGGACACCCATGACTAATACACAATTGGTGTGAGAGAAATAGTGAGT
GTATGTATCTAGATGAGATTTGATTGATATAGAGAGAACTAGCTAGTATTAGAAGTTGTAGCACTTGTGTAAGTTTGTGACTGAGAACTTT