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Detailed information on CNT30718041


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8WJN0|MATK_VAUCA, E-value = 3e-96

BLAST vs NONCODE:
NONVVIT003033, E-value = 6e-126

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617492Malus domestica goldenSesamum indicum13.1866.5881.12249forward
CNT30710128Malus domestica goldenGlycine max4.5525.984.8886forward
CNT3045553Malus domestica goldenPrunus dulcis34.0986.2191.3644forward
CNT30234706Malus domestica goldenBrassica oleracea4.452586.984forward
CNT30610227Malus domestica goldenGossypium raimondii8.6334.3983.44163reverse complement

Expression of CNT30718041

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MLIFPFIHFWISCGLTNSTYGMDESFATYKCVKDASRTKKPSTLLLS

>peptide 2 (61 aa)
MYSLKKRYQKRLIVNEKIDYEEKVKWICIHIHENYIGARIIVDYILKKITFFFGVIRLFKL*

>peptide 3 (36 aa)
MNFLAFDYVPPKGLVAYLNNNPKKKKSRKCLDNWFV*

>peptide 4 (42 aa)
MDLLPNSEGFEPRFPDEWGRVLVHLIHNLNVGIFPLKKENIE*

Sequence

>CNT30718041
ATCCAATCAAAGGAATAATTGGAACTAATGTATCAATCTTCTTATAGCATTATCCATTATAAATGAATTTTCTGGCATTTGATTATGTACCACCGAAAGG
TTTGGTCGCATACTTGAATAATAACCCAAAAAAAAAAAAATCAAGGAAATGCTTGGATAATTGGTTTGTATAAATCCTTCCTGGTTGAGACCACACATAA
GAATGACATTGCCATAAAATTGACAAGATAATATTTCCACTTATTCATCAGAAAAGGGGTATCATTCAAAGAAAGAATTGATTTTCCTTGATATCAGGGG
TATCATTCAAAGAAAAATCAATATCTAACATAATGCATAAAAGAATCCTTAAAGAACCATAAGATGGCAGTCGGAAAATCATTAACGAAGACTTCTACAA
GATTTTTTTTTCCATAGAAATGTATTCACTAAAAAAAAGATACCAGAAGAGGCTAATCGTAAATGAGAAGATTGATTACGAAGAAAAAGTAAAATGGATT
TGTATTCACATACATGAGAATTATATAGGAGCAAGAATAATTGTGGATTACATTTTGAAAAAAATCACTTTTTTTTTTGGAGTAATAAGACTATTCAAAT
TATAACATTCGTGAAGAAAGAGTCTTAATAAATGTAAAGAAGATGGATCTTTTACCTAATAGCGAAGGGTTTGAACCAAGATTTCCAGATGAATGGGGTA
GGGTATTAGTACATCTGATACATAATTTAAATGTGGGAATTTTTCCTCTAAAAAAAGAAAATATTGAATGAATTGATCGTAAATGATAAGATTTTACAAT
TTCTGTCGCCTCTAAGGAAGATACTAATCGTAGGGAAAACGGAATTTCTAGAATAACTGCAATTCCCTCTGACAACATTTGAGAATACAAATTTTGATGT
ACCCAAAAAAATTGATTTTGATTAGAATCATTAGCGGAAATAATCAAATGATTTTGCTAATGCATTCGACTAATTAAACGTTTTACGATTAGTAAACTAT
ATTTAGTGTCATAACCTACATTATCCAACAAAATCGACCTATTTAAACCATGATCATGAGCAAGTGCATAAATATTCTCCCAAAGGATAAGTCGGTATAG
GAAGTCATGTTGCTGATGTCTATCTAGTTCTAAATATCCTTGAAATTCTTCCATTTTAAATTTGAACAAGAAAAGAAATAAGGGATTTATTGGGTTATCA
AATGATACATAGTACAATAAAGTCAAAACAAGGTATTATAGTAAGAAAATACCTCGGAACAAGTAAGACTCTTCAACAGACTCTCTAGCCTCTCTTTTTT
CATCTAATTGATTTATGTTCATTCTAGGGTAACAAGATGGTTAGAAGTCCTTTATTTTTTTCAATCCAATCGCTCTTTTGATTTTGAATAATCTTTATCA
CTATACTACCTTCTTCTACACATTTATCTCTAACCCATAATAGGTAATAGCTAATAATTAGGACTCATAAGAATTTATAATCCACTCATGGGAAAAGTTT
TTCCCGTATTAAGAACTAATATATTTTTTAACATCTAATTAGATCGGGTAATCATTCAAAAATTAAGAACAGAAGCTCATTACTTTTTGTTTCCCTATAA
TTGGAACCGTAGTAGGGCTTTACCCATTTATTCACTCGACCAAATTCATTTATTTTATTACACGACAAGAATTCAAAATTTTTAAATAAGGTTTTGGACC
TATTCGGTAAGAATGAAATATTCTCTGAATTATCCATTGATACGACATGCTGATTTTTCCATTCATTCATTTCTGGATTAGTTGTGGTCTTACAAACTCT
ACATATGGTATGGATGAATCTTTTGCTACATACAAATGTGTAAAAGATGCTAGCCGCACTAAAAAGCCGAGTACTCTACTGTTGAGTTA