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Detailed information on CNT30717952


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30405603Malus domestica goldenBeta vulgaris20.899.828875forward
CNT3048584Malus domestica goldenPrunus dulcis19.2221.4392.7569forward
CNT30637615Malus domestica goldenCapsicum annuum22.8411.2593.982reverse complement
CNT30666800Malus domestica goldenTriticum dicoccoides15.3223.2189.0955forward
CNT30598237Malus domestica goldenFraxinus excelsior24.2314.1583.9187forward
CNT30655378Malus domestica goldenRosa chinensis20.895.0593.3375forward
CNT30620547Malus domestica goldenCajanus cajan27.5831.5389.999forward
CNT30357951Malus domestica goldenLactuca sativa20.067.6593.0672forward
CNT30411335Malus domestica goldenPapaver somniferum20.338.4687.6773forward
CNT30574575Malus domestica goldenVitis vinifera20.894.9193.3375forward
CNT30724130Malus domestica goldenLupinus angustifolius20.3321.8690.4173forward

Expression of CNT30717952

Peptides detected in this lncRNA

>peptide 1 (38 aa)
TITSIRYSFRFSSVLFTESGSFGVIVDGCLAIPSISST*

Sequence

>CNT30717952
ACGATTACCTCGATAAGATATTCCTTTCGTTTTTCCTCTGTGTTGTTTACAGAATCTGGTTCTTTTGGGGTTATAGTTGATGGTTGTTTAGCAATTCCAT
CCATCTCTTCTACATAACCGGACACGAAAGTTTCTTTTTTCATCCAGCTCCTCGTGAATTAAACAATTAAAAATAATTAAACAAAAAAAAAATACACGGT
TAATAATATATGGAATCGTGGGATTCTTTGAAATTTGATCTAATCGATTATAAATTATAAAATTTTTGTGTTTTTATATATAATTTAACACGTATTCTAT
TTATAGATGATGTCGGTTTGATAGAACGCTATAATGAATTTTTATTTTATTTTTCCTTT