Detailed information on CNT3071730


BLAST search results

BLAST vs Swiss-Prot:
sp|P51819|HSP83_IPONI, E-value = 7e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701822Quercus suberQuercus lobata36.2145.2397.96147forward
CNT30282455Quercus suberChenopodium quinoa21.186.1586.0586forward
CNT3047606Quercus suberPrunus dulcis22.4110.4787.9191forward
CNT30566785Quercus suberActinidia chinensis26.3540.2387.85107forward
CNT30311909Quercus suberCamelina sativa27.3423.4786.49111forward
CNT30468549Quercus suberSaccharum spontaneum20.4436.0984.3483forward
CNT30606370Quercus suberGossypium raimondii27.8354.0790.27113forward
CNT30625473Quercus suberDaucus carota24.1429.7985.7198forward
CNT30351629Quercus suberEragrostis tef24.1429.8883.6798forward
CNT30107294Quercus suberOryza longistaminata23.6535.2983.3396forward
CNT30175658Quercus suberVigna angularis27.3444.9489.19111forward
CNT30558210Quercus suberPanicum hallii20.4440.2985.5483forward

Expression of CNT3071730

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MIKLRSWLISAWKAKVSASAICTSAITAPEESAREKKTKESERNREKLFEREFRKQMNCDE*

>peptide 2 (53 aa)
IRGIADEFTKEDLFVAIEGVDDQAEKLVDLSLESEGLCISHLHIRHYCTRRKR*

Sequence

>CNT3071730
ATCAGAGGAATTGCTGATGAGTTCACGAAGGAAGATCTCTTTGTTGCTATAGAAGGTGTTGATGATCAAGCTGAGAAGCTGGTTGATCTCAGCCTGGAAA
GCGAAGGTCTCTGCATCAGCCATCTGCACATCCGCCATTACTGCACCAGAAGAAAGCGCTAGAGAAAAGAAAACTAAGGAAAGCGAGAGAAACAGAGAGA
AACTTTTCGAGAGAGAGTTTAGAAAGCAAATGAATTGTGATGAGTGAGAGAATAGTGTAGAGGTGAATGGGTTTATATAATTGAGAGGGAGAGGGTTTCC
GATGTAAGCACGGAGAAAGGAGAGAGAAGACTTGGAGTTGAATTAAGGGATTCTGGAGTCTTCTACGGCTCTGTGGAATTATTTGATTTTTTTTTTTTTG
GTGGGC