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Detailed information on CNT30717191


BLAST search results

BLAST vs Swiss-Prot:
sp|Q42662|METE_PLESU, E-value = 5e-32

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534084Malus domestica goldenEucalyptus grandis23.8823.5391.6748forward
CNT30403132Malus domestica goldenBeta vulgaris21.8913.7193.1844forward
CNT3096726Malus domestica goldenSolanum tuberosum22.3918.9995.5645forward
CNT30650401Malus domestica goldenRosa chinensis76.6217.4886.36154forward
CNT30624889Malus domestica goldenDaucus carota49.2526.0586.8799forward
CNT3024604Malus domestica goldenPopulus trichocarpa47.269.7886.3295forward
CNT30118300Malus domestica goldenCitrus clementina49.2536.487.8899forward

Expression of CNT30717191

Peptides detected in this lncRNA

>peptide 1 (62 aa)
RQSLSQSSLIDLNNTDTSLLKILHFILDGQSNLKGGLESGLVISDERPVQDDDWWLHTSRSI*

Sequence

>CNT30717191
AGGCAATCCCTCTCTCAAAGCAGCCTCATCGATCTGAATAACACTGATACCAGCCTTCTCAAGATCCTCCACTTCATCCTTGATGGCCAAAGCAATCTGA
AAGGTGGTCTCGAATCTGGGTTGGTCATTTCTGACGAACGACCAGTTCAGGATGATGATTGGTGGCTTCACACATCGAGATCCATATGATTGCACCCACC
C