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Detailed information on CNT30716810


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3047211Malus domestica goldenPrunus dulcis6.4823.1194.26122forward

Expression of CNT30716810

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MSTPSAPTHPNLPSPPHCRLSSSIFTILPSSASINGLDLPRSLTKLSISFSLSSFPPKTNPKSCDLGARVE*

>peptide 2 (36 aa)
MWLPLKVSASTARFGILMDISDRGVSVSLYHFLLKN*

>peptide 3 (33 aa)
FGENIPRGTMGVVRTLGRDPLNLKRFHSINTTK*

>peptide 4 (33 aa)
MSVFSFSVPQIRLFDVFLNHSTFKGIPNMNCSM*

>peptide 5 (29 aa)
FWGKHPEGNHGCREDPWPRSTKPETFSFN*

Sequence

>CNT30716810
ATTTTGGGGAAAACATCCCGAGGGGAACCATGGGTGTCGTGAGGACCCTTGGCCGAGATCCACTAAACCTGAAACGTTTTCATTCAATTAACACCACAAA
GTAGACTCTCCATGAACCCATAAACAAAGCTCAATCAACATTGGAGGCGTCGGAGCTTGTTTGGAGTTGAATCAAGAACACCCATTTCAAGGGTTTCCGG
CAGATCGAAGTGGATTTCAGGTGTTTTCTGCCCAAATTAGACTTGGCCACAGGTTTTAGCTGCTGAAAGTTCGTATCAACAAGGATTCTTGGCAAATCTC
AGTATATGTGGCTACCTCTAAAGGTGTCGGCCAGCACAGCTCGATTCGGAATCCTAATGGACATTTCAGATCGAGGTGTGTCAGTCTCGTTGTACCACTT
TCTATTAAAAAATTAATTAATTAAATATTAGAAAAACAAAATACCAAAAAAAACCACCCACACCCAAATCCCTCCCCCCGGCAGAAACTTCCCATCAACC
CATGTCCACTCCCTCCGCCCCAACGCACCCAAACCTTCCTTCACCACCCCACTGCCGCCTCTCTTCCTCCATCTTCACCATCCTACCCAGCTCAGCCTCC
ATCAACGGTCTCGATCTTCCTCGCTCCCTAACCAAACTCTCTATCTCTTTTTCTCTCTCCTCTTTCCCCCCAAAAACAAATCCCAAATCGTGCGATCTGG
GCGCGCGAGTGGAATAAGGGGGATCGCGAGTGCGTGGGAGCGAAGGAGGTGTGGGGTGTGGCGGCAGCTGCGACAGAGGAGGGACTGGATCTCTCCCATT
TGTCTGTGGGTGTATCATCAGCCTCGACGACGAACTCCGACGAGAGTCGTTGAGTTCGAAGCCTGCTGGGTTTTACATTTTTTTATTAATTTTTTACATT
ATTTATTAATTTTTTAAATTTTTTATTAATTTTATATTGTGGCTGACGTCGCCCTCACATGAGTGTGTTTTCATTTTCCGTCCCTCAAATAAGGTTATTT
GACGTGTTCCTCAACCACTCCACATTCAAAGGGATTCCTAACATGAATTGCAGTATGTAATTGATTCAATTATGGAATCGTGAATAATCATCGGTTCGGT
CGGTACATAATAATTTATACTTTTTTCTTCTATATGAAGAATGGCTAATGTATGACGAAGTCTTAACAAGAATTCAATCAATTTAAACCCCATTATTTAT
AATTTTTTTTTTTAATTATAACTAACATAACATGAATAAATAAGCACAAATAAACAAGTCATTTTGAATCTCTATCTTCAAGTAACGTGATAGGATAAAT
ACAACAATTTCACACTTCTTAGAGTACCAAGAACTCATAAGAAATCATTAAAAAGATTTAATTGACTGATTTTTTATTTTATTTTATCAACTTCAATCTA
TTTGGCATAGTGAACCTTATTGTTCTTATTAATATTTTATGTGATTTTTAACACCCCCGCCCCTTCCTCCCTCTTCTCTTTTGGAGTCTAATTTAGAGAA
AAAATAGATAGAGAATAGTAAGGGAACAATTGATTTTGAACAACAGATGTCTTTCACATCCAACCAAAAATCCTATTATAACTTTTTAATGGCAGTTCCA
AAAAAAAAACGCACCTCTATTTAAAAAAAAAAACGTATTTGTAAAAATATATGGAAATGGAAGGGATATAGGGTACCATTGAAAGCTTTTTCGTTAGCGA
AATCTCTTTCTACCAAGATTCTAAAAGTTTTTTGTTTTTCTTTTTGTGTAACAAATAAATAATCTGAATCGTTTTAATAACCAATAAAGTGATATAATTT
GTTTATAGTTTATGTATAAGATTTATAAGTTATAAAAAGATGAATCGTTCTAATAACTATTTCTTTTTCAGTTTCATGTTTT