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Detailed information on CNT30716661


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315642Malus domestica goldenCorylus avellana32.5820.9588.12101forward
CNT30515285Malus domestica goldenJuglans regia30.6512.5589.4795forward
CNT30499557Malus domestica goldenCoffea canephora47.7448.2183.78148reverse complement
CNT30618136Malus domestica goldenSesamum indicum51.6128.1286.88160reverse complement
CNT30379393Malus domestica goldenManihot esculenta3030.6989.2593forward
CNT30404033Malus domestica goldenBeta vulgaris32.933.0187.25102forward
CNT30526114Malus domestica goldenPhaseolus vulgaris34.5235.286.92107forward
CNT30507014Malus domestica goldenNicotiana attenuata28.7128.885.3989forward
CNT30711674Malus domestica goldenGlycine max25.4825.9992.4179forward
CNT3046251Malus domestica goldenPrunus dulcis60.9762.7990.48189forward
CNT3092489Malus domestica goldenSolanum tuberosum31.2932.6685.5797forward
CNT3084823Malus domestica goldenVigna radiata34.5235.285.05107forward
CNT30541074Malus domestica goldenBrassica napus30.9731.3786.4696forward
CNT30509042Malus domestica goldenSolanum lycopersicum38.3938.8985.71119forward
CNT30146769Malus domestica goldenMedicago truncatula26.4526.9785.3782forward
CNT30612441Malus domestica goldenArabis alpina47.4247.7383.67147reverse complement
CNT30652801Malus domestica goldenRosa chinensis51.6152.2988.12160forward
CNT30625980Malus domestica goldenDaucus carota27.7428.287.2186forward
CNT30479862Malus domestica goldenArabidopsis halleri34.5234.9785.05107forward
CNT30356369Malus domestica goldenLactuca sativa39.036.4385.12121forward
CNT30154450Malus domestica goldenPrunus persica66.7767.8789.86207forward
CNT30572433Malus domestica goldenVitis vinifera26.7715.0687.9583reverse complement
CNT30644548Malus domestica goldenCannabis sativa28.7127.6489.8989forward
CNT30575771Malus domestica goldenOryza barthii34.8417.8884.26108forward

Expression of CNT30716661

Peptides detected in this lncRNA

>peptide 1 (56 aa)
PSLLTKTYNPSGGNKVLGRWFSLCGLGPSWLYSGLPIPSWESWPVWLERRLRLHGS*

Sequence

>CNT30716661
GCCGAGTTTACTAACGAAAACTTATAACCCAAGTGGGGGCAACAAGGTGTTGGGACGTTGGTTCAGCCTCTGCGGGTTGGGTCCGTCGTGGCTCTATTCT
GGCCTGCCCATTCCAAGCTGGGAGAGTTGGCCCGTGTGGCTTGAGCGAAGGCTCAGGCTTCATGGTTCCTAGAGTGGAGGGCACTGCGTAAGGCTGGCTT
CACAGAGCAACGATTACTTCCCGCTCCCGGCAGTGGAAGGATAACAGGTCGGTGCCACCCGGATCCACTATGGCCCGCTGGACTGTTCCAATTGAACCAA
CATTTTTTTT