« Back to Malus domestica golden search


Detailed information on CNT30716451


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381249Malus domestica goldenManihot esculenta16.5920.7286.9669reverse complement
CNT30526628Malus domestica goldenPhaseolus vulgaris22.1231.5185.8792reverse complement
CNT3044405Malus domestica goldenPrunus dulcis37.7421.7285.35157reverse complement
CNT3086999Malus domestica goldenVigna radiata22.368.8683.8793reverse complement
CNT30654465Malus domestica goldenRosa chinensis32.699.2484.56136reverse complement
CNT30620093Malus domestica goldenCajanus cajan28.6112.3783.19119reverse complement

Expression of CNT30716451

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MIKMASPADLTSMTPSQECHMKLKDIKNVY*

Sequence

>CNT30716451
ATGTGATTCCACTATCATAGTTGAAGCAACCTTCATTCCAAGATTTGTTAAGTCGAGCTGAAGAAGAATTCGGGGTTTGATCATCTCATGGGTGCTATCA
CAATCCCGTGCTGTGAAGATACCTTCCTTGATCTCACCTCTTACTTAAGTGTATGAGCATTAGGCGGCTAACATATATTTTACAGCACAGTTTTGACACC
AGTTGCTGCAGAGGCTTCTGATAATTTCATGGGCTCCAATTCCAAACCGCTTGAGAGCTCATGATCAAAATGGCCAGCCCAGCGGACTTAACTTCAATGA
CACCAAGCCAAGAATGTCATATGAAGTTGAAAGATATCAAGAATGTTTATTGAAAATCCTTTATACTTATTACTTGTTCTGCAAAGATAATTGATAATAT
ACTATTTTTCTTGTTC