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Detailed information on CNT30716413


BLAST search results

BLAST vs Swiss-Prot:
sp|P32295|ARG7_VIGRR, E-value = 3e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526713Malus domestica goldenPhaseolus vulgaris13.5926.8885.3375forward
CNT30159319Malus domestica goldenPistacia vera11.0524.0290.1661forward
CNT30560987Malus domestica goldenActinidia chinensis30.0732.6884.34166forward
CNT30508399Malus domestica goldenSolanum lycopersicum13.7735.8584.2176forward
CNT30645670Malus domestica goldenCannabis sativa29.3531.4680.25162forward
CNT30113474Malus domestica goldenFicus carica29.3513.6179.63162forward

Expression of CNT30716413

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MYKIWKFFGLQNCNNHTVRVIALHNPLPNHTALKRDMRSRNASCPQGIVRPPIG*

>peptide 2 (44 aa)
QSPFRHLPNLIQGEQYVSPSSIEKKCTKSGNFLVYKIVTITQFV*

>peptide 3 (56 aa)
MHLVRRELLDHPLDDQTQILLQLHLASVEMQAGRGKIWEPQIGASHSHQHKLQNNL*

Sequence

>CNT30716413
ACAGTCTCCATTTAGGCATTTACCTAATCTGATTCAAGGGGAACAGTATGTGTCTCCCTCCTCAATCGAAAAAAAATGTACAAAATCTGGAAATTTTTTG
GTTTACAAAATTGTAACAATCACACAGTTCGTGTAATTGCTCTCCACAATCCACTACCCAATCATACTGCACTCAAGCGAGATATGAGATCAAGGAATGC
ATCTTGTCCGCAGGGAATTGTTAGACCACCCATTGGATGATCAAACCCAAATTCTTCTTCAACTTCACTTAGCAAGTGTTGAAATGCAGGCTGGCAGAGG
AAAGATATGGGAACCACAAATCGGTGCTTCTCACTCTCACCAACATAAACTGCAAAATAACCTTTAGGGACATCTGCTAAATTATATGAAGCTCCTTGAC
TTGAATTTGAAAAAGACCGTCGAAAAAGTTTCTTAGCAGGAATTACAGCAGGCAGACGGAACCCCATTGTAGTAAATCTTTGGAGGAAAGACTAGCAATA
GAGTTTATAAAAACTTGAAGATCTCAAGGAACTAGCAACTGCAAAACAAGAA