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Detailed information on CNT30716337


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG84|UBI4P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693916Malus domestica goldenOryza sativa85.7171.1384.371062forward
CNT30641270Malus domestica goldenNymphaea colorata86.2853.5382.971069forward
CNT30528288Malus domestica goldenEucalyptus grandis74.3368.7386.1921forward
CNT30279021Malus domestica goldenChenopodium quinoa81.3677.384.521008forward
CNT3019912Malus domestica goldenCitrullus lanatus73.7754.785.23914forward
CNT30727322Malus domestica goldenCorchorus capsularis74.1772.3185.2919forward
CNT30526024Malus domestica goldenPhaseolus vulgaris74.0969.3985.62918forward
CNT30710308Malus domestica goldenGlycine max54.8873.5987.21680forward
CNT3044330Malus domestica goldenPrunus dulcis71.9172.8587.99891forward
CNT30169882Malus domestica goldenPistacia vera86.251.7783.91068forward
CNT30636316Malus domestica goldenCapsicum annuum86.5251.7185.261072forward
CNT3096920Malus domestica goldenSolanum tuberosum85.5588.784.431060forward
CNT30191758Malus domestica goldenSecale cereale86.270.1286.71068forward
CNT30305252Malus domestica goldenTriticum aestivum68.3699.1886.54847forward
CNT30226205Malus domestica goldenHordeum vulgare71.5985.9586.92887forward
CNT3089455Malus domestica goldenVigna radiata72.874.1884.7902forward
CNT30553681Malus domestica goldenOryza glaberrima65.2974.7785.04809forward
CNT30242826Malus domestica goldenAvena sativa73.5372.8888.04911forward
CNT30312399Malus domestica goldenCamelina sativa86.4482.0183.571071forward
CNT3077383Malus domestica goldenBrassica juncea67.8864.8984.54841forward
CNT30461176Malus domestica goldenSaccharum spontaneum73.6126.7584.54912forward
CNT30141342Malus domestica goldenLolium perenne86.2882.68871069forward
CNT307928Malus domestica goldenZea mays65.8668.4686.4816forward
CNT30608559Malus domestica goldenGossypium raimondii84.4268.5582.71046forward
CNT30229013Malus domestica goldenAnanas comosus86.2867.7983.911069forward
CNT30217449Malus domestica goldenKalanchoe fedtschenkoi86.270.7884.271068forward
CNT30652285Malus domestica goldenRosa chinensis72.5673.8787.88899forward
CNT30623044Malus domestica goldenDaucus carota84.3452.9984.981045forward
CNT30689801Malus domestica goldenTriticum urartu86.277.2286.331068forward
CNT30722465Malus domestica goldenTriticum spelta64.6570.9586.77801forward
CNT30477817Malus domestica goldenArabidopsis halleri81.9294.8682.961015forward
CNT30596296Malus domestica goldenOryza meridionalis85.7177.1284.841062forward
CNT30359535Malus domestica goldenLactuca sativa73.2853.7684.8908forward
CNT30153569Malus domestica goldenPrunus persica55.0475.6187.24682forward
CNT30704857Malus domestica goldenPrunus avium86.8468.1488.011076forward
CNT30110940Malus domestica goldenOryza longistaminata84.6738.6884.561049forward
CNT30116770Malus domestica goldenOryza nivara85.7175.9784.561062forward
CNT30593897Malus domestica goldenEragrostis curvula67.5574.5386.02837forward
CNT30174705Malus domestica goldenVigna angularis74.0959.3485.29918forward
CNT30111644Malus domestica goldenFicus carica86.6875.3783.431074forward
CNT3050995Malus domestica goldenCucumis sativus86.6896.585.381074forward

Expression of CNT30716337

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILALTLSMVSDDSTSRVMVLPVRVLTKICIPPRRRSTKWRVDSFWML*

>peptide 2 (49 aa)
MESGLLLDVVVGKGTAVLKLLSSKDKPLLVWGDALLVLDFGLDIVDGVG*

>peptide 3 (53 aa)
MPSLSWILALTLSMVSDDSTSRVMVLPVRVLTKICMPPRRRSTKWRVDSFWML*

>peptide 4 (40 aa)
MVSELSTSKVMVFPVKVLTKICMPPRRRNTKWRVDSFWML*

>peptide 5 (40 aa)
MVSDDSTSRVMVLPVRVLTKICIPPRRRSTKWRVDSFWML*

Sequence

>CNT30716337
CGGAATTTATTTATTGAAACATAGTAAAAGATAAACCAAACTTGTCCATATGCCTCAATCAGGAGGCAGAAACAGTACCATCAAATTTAAATACATAAAA
ACAGTAAAAACATAAACAGTTCAACGAGAACGGGTAGAAGACGGCCACCGGCCACATCCAGCACTTAAAAACCACCACGGAGACGGAGGACAAGGTGAAG
GGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTCCTCCCATCCTCCAACTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCCGGAGGGATGCCTTCC
TTGTCCTGAATCTTAGCCTTCACATTGTCGATGGTGTCAGAGCTCTCCACCTCCAAGGTGATGGTCTTTCCTGTCAAGGTCTTGACGAAAATCTGCATGC
CACCACGGAGACGCAACACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTACGGCCGTCCTCAAGCTGCTTTCCAGCAAAGATAAG
CCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATGGTGTCGGATGACTCCACCTCGAGGGTAATGGTCTTGCCA
GTGAGGGTCTTAACGAAGATCTGCATACCACCGCGGAGACGAAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTCCTGCCGT
CCTCCAGCTGCTTACCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATTTTGGCCTTGACATTGTCAATGGTATCGGATGA
CTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCATGCCACCACGAAGACGGAGCACCAAGTGGAGGGTTGACTCTTTCTGG
ATGTTGTAGTCTGCAAGGGTACGGCCATCTTCGAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATCCCTTCCTTGTCTTGGATCTTGG
CCTTGACGTTGTCGATGGTGTCGGATGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCATTCCACCGCGAAGACGGAG
CACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCTGCAAGGGTTCGGCCATCTTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGG
GGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG