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Detailed information on CNT30716010


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 6e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317234Malus domestica goldenCorylus avellana38.6236.5485.71224forward
CNT30701193Malus domestica goldenQuercus lobata39.3118.1185.09228forward
CNT30616538Malus domestica goldenSesamum indicum21.0324.8587.7122forward
CNT3070976Malus domestica goldenQuercus suber39.3144.8885.53228forward
CNT30378910Malus domestica goldenManihot esculenta38.7919.4183.56225forward
CNT30172108Malus domestica goldenTrifolium pratense36.5519.7282.55212forward
CNT30311404Malus domestica goldenCamelina sativa29.1425.7284.02169forward
CNT30605018Malus domestica goldenGossypium raimondii26.3824.0985.62153forward
CNT30480204Malus domestica goldenArabidopsis halleri29.1446.6983.43169forward
CNT3028352Malus domestica goldenTheobroma cacao26.0316.3288.08151forward
CNT30119392Malus domestica goldenCitrus clementina32.5920.5785.19189forward
CNT3035896Malus domestica goldenCucumis melo25.1716.2286.99146forward

Expression of CNT30716010

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MCTTIRQIKRRSLGVFYCIQRFQYKQFLVKLHQN*

Sequence

>CNT30716010
CTATTGATAGGAATTCTTGAATGTGCACCACAATTAGACAAATAAAACGAAGGAGCTTGGGAGTTTTTTACTGCATACAGCGGTTTCAATACAAGCAGTT
TCTAGTAAAATTGCATCAGAACTAATGGAGTCCACAACAAGAGAACCTCAACACAAGCAGTAAGTTCGGGTAATGTTACAGATGAACGGCCATGGCTTGA
GGTTTCTTCACTTTCCAGGGACGAAGTTGGTGGCGTAAGCCCATGCGTTGTTGGCCACTGGGTCAGCGATGTGGTCGAAGAGGTTCTCCACCGGTCCCTT
TCCAGTTACAATAGCCTGAACAAAGAATCCGAACATTGAGGTCATAGCCAGACGCCCGTTCTTAAGTTCCTTCACCTTCAGTTCAGCAAAAGCTTCGGGA
TCATCAGCAAGTCCAAGGGGGTCAAAGGCCGCCCTCAGAGAAGATTTGCGATCCAGCCTTGAACCAGACAGCCTCGCCGAACTTGACGCCATTCCTTGAC
AAGATTTCTGGGAAGACGCATCCCAGTGCACCAAGCATGGCCCATCTGGAGTGGATCACCTCAAGCTCACGGTTCTTGGC