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Detailed information on CNT30715826


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30528820Malus domestica goldenEucalyptus grandis8.2224.2489.0664forward
CNT30495244Malus domestica goldenOlea europaea11.327.5985.2388forward
CNT30154398Malus domestica goldenPrunus persica24.2668.2389.42189reverse complement

Expression of CNT30715826

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MNVRISRLVKSSYITIPFLFSIIPIKSIRNQQNKKQVDLTHCIIIISTILISKLDRDEIGSFFFFGLRRNLSIYLI*

>peptide 2 (29 aa)
MKLDLSFSSDYAGICLYILFNLFVPRRSI*

Sequence

>CNT30715826
ATATTTTAATATATAATCAAAATTATAACATTAAAATTTATTATAGTATGGTTATAAATTTTCTATTTTAATAAATTAAATATATTATTAAATAAATAAT
ATATTATTAATTATTAAATAAATAATATAATTATTATAAATATTATTTATTAAATATTATAATGAATGTAAGGATAAGTCGTCTCGTTAAATCTTCATAT
ATTACCATTCCTTTCCTATTTTCCATTATTCCAATTAAATCGATTAGAAATCAACAAAATAAAAAGCAAGTGGACCTAACCCATTGCATCATAATTATAT
CCACTATTCTCATATCAAAATTGGATAGAGATGAAATTGGATCTTTCTTTTTCTTCGGACTACGCAGGAATCTGTCTATATATCTTATTTAATCTTTTTG
TTCCTAGACGTTCTATATGAATAAATTAGGAAGGAATAAAGTACTATTCCCTTCCTTTACCGAGAAACATTTATTCCAAGTCACAACATACAAGCCATTT
TAAATATCTTTCTTTGATTCCAATTCCAGAACACAAGATCCGTTTTATTAGTTATATCTTATATATCTATTTATATATTTAGCAAATCGTTATTTCATGT
ACTAAATATTTCCATCCATATTGATACATGCAATATTTTTGTTCCGACAACGTAATGGGGAATGTATGTGAGAAGGGTACTTTCATTTCGAGTCTCATAT
TATTTAATATTTAATTAACTAATATGTATTTAATTCAATACAAATATTAATTTAATAATAGGAAATTTATTAAAAGAAA