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Detailed information on CNT30715684


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30491922Malus domestica goldenOlea europaea9.8529.3189.4185forward
CNT30110673Malus domestica goldenOryza longistaminata8.6927.6889.3375forward

Expression of CNT30715684

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MMHRKTQRRLGLHCLRILTATVPGLPVIVNYGP*

>peptide 2 (37 aa)
MQCILRVRPFIAIFIERSINVDMTELSLLWSLQFNYW*

>peptide 3 (36 aa)
MDPKYWLCSILGAFLLIVLTMVYLTIHLTICISPFT*

Sequence

>CNT30715684
TAGAGCTTTAAGTTCTTCTTGCATTGCCTCTTTCCACACCTCTTGGCTGTTGGCCTCGTGGAAATTCTGAGGCTCCTGGTAACTGGATATAGTTATTAGG
AATGCAGCATGATTCGGTGTCACTCTCTTGTATGACACACAATTGGAGATGGGATATGTGGGTTTGTACATGACAAAATCCTGAAGTCTTGTGGGAGTTT
TTCTAACACGCATTGGATTGCGTCGAGGAGCTGGAAGAGTTGTTTCACACTCGTTCACATCATCTTGATTGTCACAATTGTCATGCAGTGTATCCTCAGA
GTGAGGCCCTTCATTGCTATCTTCATTGAGAGAAGCATCAACGTTGACATGACTGAGCTCTCGTTGTTGTGGTCCCTCCAGTTCAATTATTGGTAGTGGG
AACACATCCAAGATGCCATCCCCTTGGGCTGTGATTTCACTTGACTTGCTGAAAAAGGGGTTAGTTTCATGAAATCACACATATTTGGACACAATGAATC
TCCTTAGTTGGGGATTATAACGCATGGTACTTCCTTAGCTTGTAGGCGATATGAACACGATACCAAGGTAAACCCATGGAAATACCCATTTATCAATGAA
AAATAAACACAACGTAACTTTATTGCATTGGAAAAAACTATGATGCATCGGAAGACTCAAAGAAGGCTTGGTCTTCATTGTCTTCGAATTTTAACTGCAA
CTGTACCTGGGCTACCTGTGATTGTAAATTATGGACCCTAAATATTGGTTGTGTTCAATTTTGGGTGCATTTTTGCTCATCGTCCTAACTATGGTGTATC
TCACCATACACCTAACCATTTGCATATCTCCTTTCACTTAACTCTAGTTAACTTTCACATTAG