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Detailed information on CNT30715515


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT001339, E-value = 5e-29

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525072Malus domestica goldenPhaseolus vulgaris66.1731.1586.47133reverse complement
CNT30711335Malus domestica goldenGlycine max64.1832.9184.5129reverse complement
CNT3044711Malus domestica goldenPrunus dulcis77.6132.785.26156reverse complement
CNT30384181Malus domestica goldenTriticum turgidum88.0627.1584.18177reverse complement
CNT30552256Malus domestica goldenOryza glaberrima61.1947.4985.37123reverse complement
CNT30437708Malus domestica goldenAegilops tauschii33.8321.7985.2968reverse complement
CNT30257732Malus domestica goldenAvena sativa88.0665.0784.18177reverse complement
CNT30266045Malus domestica goldenBrassica rapa88.0639.9584.18177forward
CNT30141326Malus domestica goldenLolium perenne59.736.1486.67120forward

Expression of CNT30715515

Peptides detected in this lncRNA

>peptide 1 (40 aa)
RTLDGESPASKSITSLSSDPSNMRHMESHVNQQGPPCKVK*

Sequence

>CNT30715515
CCGCACCTTAGATGGCGAGAGTCCAGCAAGCAAAAGCATCACTAGCTTGAGCTCTGACCCTAGTAACATGAGACACATGGAATCTCATGTGAATCAGCAA
GGACCACCATGCAAGGTTAAATAGTCCTGGGTGATTAATAGTGAAGTAGTACTGGAAGGAAAGGGTGAAAAGAACCCAGGGAGTGAAATAGAAAATGAAA
C