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Detailed information on CNT30714975


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514280Malus domestica goldenJuglans regia23.1510.588.4169forward
CNT30703316Malus domestica goldenQuercus lobata23.8323.1395.7771reverse complement
CNT3069056Malus domestica goldenQuercus suber23.836.7294.3771reverse complement
CNT3086859Malus domestica goldenVigna radiata23.4923.189070reverse complement
CNT30510959Malus domestica goldenSolanum lycopersicum23.4922.9588.5770reverse complement
CNT30648233Malus domestica goldenRosa chinensis46.9845.688.57140reverse complement
CNT3029804Malus domestica goldenTheobroma cacao20.4719.8791.861reverse complement
CNT3058191Malus domestica goldenAmborella trichopoda28.8628.0186.0586reverse complement
CNT30174907Malus domestica goldenVigna angularis23.4922.959070reverse complement

Expression of CNT30714975

Peptides detected in this lncRNA

>peptide 1 (98 aa)
KRWWFNWFQPIRQSGLAVHRHVILPLLRAGRFRCSVKPASRIALRSKGHGPSLSPNHRAQLSTWNGRASKLQHQVLPNGSNRCPTTLVPPLGLQARVT*

Sequence

>CNT30714975
AAAAAGGTGGTGGTTCAACTGGTTTCAACCCATTAGACAATCTGGGCTAGCGGTGCACCGACACGTTATCCTTCCACTGTTGAGAGCGGGACGTTTTCGC
TGCTCTGTGAAACCAGCCTCACGCATTGCCCTCCGCTCTAAGGGCCACGGCCCAAGCTTAAGCCCGAACCACAGGGCCCAACTCTCAACTTGGAACGGGC
GAGCCAGCAAATTGCAACATCAAGTCCTGCCAAATGGATCGAACCGATGTCCCACCACCTTGGTGCCCCCACTTGGGTTACAAGCAAGAGTCACTTAG